Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03861 ATGGGTCCTCTTACCATGGATACCATCTTTGATCTCATCGAAGAGGCTAAGCTCCGTTTTCTCTGGTGGTCTCTTTGTATTTTCGCCATTTCCTATTTCTTAACTCATACAAGTAAATCAATGTGGATGAATATACCAATATCCATTCTTTTCTTTGCGGGTCTAAGGATTCTTGTGAACAAGGTGGAGTTTCGTTGGAAGGTTCAGTCACCTAAATTACAAACTTACCTATCTCATTTGGAGAAAAAGCAGTTGTCTCTAGACGATGAGCGTGTCTCTACTTCACTTCCCCCTCCCAAATGGAAGAAAAAGATTGATTCTCCTGCAGTGGAGGCTGCCTTGAACGATTTCATTGATTTAATATTGAAGGATTTCGTTATAAATATGTGGTATGCAGACATTACTTCAGACGGGGAGTTTCCTGAGCAGATACGGGACTTAATCATGGACGCTCTTGCTGAAGTCACGGTTAGGGTTAAAGAGATTAACATTGTTGATTTGCTCACAAGTGATATAGTTGATTTAATAAGCGATCATATAGACCTCTTCAGAAGAAATCAAGCAGCTATAGGTGTTGATGTTATGTTAACGTTGTCTTCTGAGGAGAGGGATGAAAGGTTGAAATTCCATCTGTTGAACTCCAAGGAGCTTCATCCAGCACTTATATCTCCAGAGAGTGAGTACAAGGTTCTTCAGCGGTTAATTAGTGGAGTACTGGCTACGGTACTAAGAAAACCAGAGGCTCAAGTCCCTGTCGTTCGATCAATAGCTCGGGAAATTATGACTTGCTTGATATTGCAACCTTTAATGAATTTGGCATGCCCTGCGTATATCAATGAACTGATTGAGTCTCTTCTTCTCGTCCTTAATGTCGGGGATATAAATTGGTTGGGCGGTGGTGATCAGAGTTCAAATGCTACAACTCACAATCATATTAATCACGCAGCAGCCTCTGCTGATTGGGCACAAATGTTGGACGCGGCAACTCAGAGAAGAACTGAAGTTCTTACGCCTGAGAATCTTGAGAACATGTGGGCAAGAGGAAGGAATTATGGAAAGAAAAGTCGTAAAAATGCCAAAGCTGGCTCTTGTACAAAACATTCTTCCGCAGATCAATCAGTATTTGATAAACATTTCACTCATGAAACATCAGTGACTAAACCTGGTGGATTGCATACTGTGGGTTCAGATCCCACACTATATAATGTAATTTCAGCTGCGTTGGAGTCTTCAGCTGATAATGGCAAGAATTTATCTTTTGAAGGAGATCATCAACAAGTTGACGAAGTGAGTGATATCAGGGATCTTGGTTCTAATAAACATAAACTTCCGCTCAGGAGAACCGAAAGTACTTCTGTCTTGGGAACCCATTCACATAAAGGCGGGCTCAATGTGTCCGAGTGCAACTCCCCTGATTTTAAGAAACGTGAAGGTTTTCGGGGAAAGACTGGTTCTGACATGGGAATCCCTTCACATAAAGGTGGGTTCAATGTGTCCGAGTGCAACTCCCCTGATTTTAAGAAGCGTGAAGGGTCTCGGGGAAAGACTGGTTCTGACATGGTTATTAGGAAAGAGGGGCAAGGTGTTCCAAAGCTTCGGTGCCGGGTGATGGGAGCTTATTTTGAGAAACTTGGAGCCACTTCTTTTGCTGTATATTCAATCGCAGTAACCGATGGACAAGAAAAAACATGGTTTGTAAAACGAAGATACAGGAACTTTGAGCGATTGCATCGACATCTAAAACATATTCCCAATTACACATTACATTTGCCTCCCAAAAGGATATTTTCCTCAAGCACAGAAGATGCCTTTGTACATCAGCGTTGCATTCAACTTGATAAATATCTCCACGATCTCCTGTCAATAGCTAATGTTGCTGAACAACACGAAGTATGGGACTTCTTAAGTGTTTCTTCAAAGAATTACTCTTTTGGGAAATCTTCTTCAATGATGAGGACCCTGGCAGTCAATGTAGACGATGCCGTGGACGATATTGTACGGCAGTTTAAAGGTGTTTCAGATGATTTAAAGCGAAAAGTTGTCACTGCATCATCCCCTCCCGCTGAAGGTTCTTCTACATCTTTCACTTGGAACATGGATGAAATGGATAGTAGTCTTCCGAGGAAAAGTGGTGTAGACAGTATGTTGAGCTCTGATAACGAGGAAGGTGAAAAAGAATCGAATCATGGACGTGAAAATATCGATAGAGAAGTAGGAGAAGATAGCGCGGGGCATTCTGAGAATGAATTGAGCTCGAAGGATTATTCACAAGGTGTAACAAACCATGGTAATGGGCCTAGTAACTTGGATCTTGATAGAAAACAGGATGTTCCAACTACAAATGGAAATCTAATTCATGATATTCCGGACGACCCAATTGGAGTGCCGCCTGAGTGGACTCCTCCTAATGTGAGTGTCCCTATTTTGAATTTGGTTGACAACATATTTCAGCTTAAGAAAAGAGGCTGGCTAAGAAGACAGGTCTTTTGGATATCAAAACAGATACTACAGTTGGTGATGGAAGATGCAATCGATGATTTACTCCTGAGTGAGATTCATTGGCTCCGGAGAGAGGAAACCATCGTCCAAGGAATTCGATCCTCTGGCCCGGTGGCACGTTTTTCTTAA 2628 0.4186 MGPLTMDTIFDLIEEAKLRFLWWSLCIFAISYFLTHTSKSMWMNIPISILFFAGLRILVNKVEFRWKVQSPKLQTYLSHLEKKQLSLDDERVSTSLPPPKWKKKIDSPAVEAALNDFIDLILKDFVINMWYADITSDGEFPEQIRDLIMDALAEVTVRVKEINIVDLLTSDIVDLISDHIDLFRRNQAAIGVDVMLTLSSEERDERLKFHLLNSKELHPALISPESEYKVLQRLISGVLATVLRKPEAQVPVVRSIAREIMTCLILQPLMNLACPAYINELIESLLLVLNVGDINWLGGGDQSSNATTHNHINHAAASADWAQMLDAATQRRTEVLTPENLENMWARGRNYGKKSRKNAKAGSCTKHSSADQSVFDKHFTHETSVTKPGGLHTVGSDPTLYNVISAALESSADNGKNLSFEGDHQQVDEVSDIRDLGSNKHKLPLRRTESTSVLGTHSHKGGLNVSECNSPDFKKREGFRGKTGSDMGIPSHKGGFNVSECNSPDFKKREGSRGKTGSDMVIRKEGQGVPKLRCRVMGAYFEKLGATSFAVYSIAVTDGQEKTWFVKRRYRNFERLHRHLKHIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLHDLLSIANVAEQHEVWDFLSVSSKNYSFGKSSSMMRTLAVNVDDAVDDIVRQFKGVSDDLKRKVVTASSPPAEGSSTSFTWNMDEMDSSLPRKSGVDSMLSSDNEEGEKESNHGRENIDREVGEDSAGHSENELSSKDYSQGVTNHGNGPSNLDLDRKQDVPTTNGNLIHDIPDDPIGVPPEWTPPNVSVPILNLVDNIFQLKKRGWLRRQVFWISKQILQLVMEDAIDDLLLSEIHWLRREETIVQGIRSSGPVARFS 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03861 875 CDD PX_SNX19_like_plant 532 636 - -
Vivi4g03861 875 SMART PXA_3 107 290 IPR003114 -
Vivi4g03861 875 PANTHER PX SERINE/THREONINE KINASE PXK 103 867 - -
Vivi4g03861 875 MobiDBLite consensus disorder prediction 749 782 - -
Vivi4g03861 875 ProSiteProfiles PXA domain profile. 107 286 IPR003114 -
Vivi4g03861 875 MobiDBLite consensus disorder prediction 679 782 - -
Vivi4g03861 875 MobiDBLite consensus disorder prediction 685 703 - -
Vivi4g03861 875 Pfam PX domain 560 637 IPR001683 GO:0035091
Vivi4g03861 875 Gene3D - 534 647 IPR036871 GO:0035091
Vivi4g03861 875 SUPERFAMILY PX domain 532 639 IPR036871 GO:0035091
Vivi4g03861 875 MobiDBLite consensus disorder prediction 449 465 - -
Vivi4g03861 875 Pfam Sorting nexin C terminal 823 867 IPR013937 -
Vivi4g03861 875 Pfam PXA domain 107 285 IPR003114 -
Vivi4g03861 875 MobiDBLite consensus disorder prediction 447 518 - -
Vivi4g03861 875 MobiDBLite consensus disorder prediction 718 748 - -
Vivi4g03861 875 ProSiteProfiles PX domain profile. 530 642 IPR001683 GO:0035091
Vivi4g03861 875 SMART PX_2 528 638 IPR001683 GO:0035091
Vivi4g03861 875 MobiDBLite consensus disorder prediction 503 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03861 Vivi-Chr4 157959823 157965239 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03861 K17925 - gmx:100804013 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03861 4 157959823 157965239 Vivi4g03861 4 157959823 157965239 ECH