Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03852 ATGAGTGCCACTGCTTTCAGCTCCATTTTCTTTAACAGAGCTCACTCTTCCAACAAGGATTTGATAAAGCAACAGAATGTGAAGTTGCGTAGTAAGTGTTCGATCAAATGTGGTATAGCAACTTCTCAAAAGAATCTGCGTGTTGGTGTTCTTGGAGCAAGTGGCTACACTGGTTCTGAGATTCTTCGGCTTTTGGCAAATCATCCACACTTTGGGGTTGCACTGATGACCGCTGATAGGAAAGCTGGACAGACAATCTCATCTGTATTCCCTCATCTGGGCACACAAAACTTGCCAGATTTGATTGCAATAAAGGATGCAGATTTTTCTGATGTAGATGCTGTATTCTGTTGTTTACCTCATGGAACTACGCAGGAAATAATTAAAGGCCTTCCGAAGCACTTGAAGATTGTTGATCTTTCTGCAGATTTTCGTCTAAGAGATGTATCTGAGTATGAAGAGTGGTATGGTCAGCCACACAGGGCACCAGATTTGCAGAAAGAAGCTATCTATGGATTAACAGAAATTTTAAGGGAGGAAATAAAGAATGCACGCCTAGTTGCTAATCCTGGTTGTTATCCAACTTCCATTCAACTTCCTCTTGTTCCACTGATAAAGGCTAATCTTATTCAGACTAGTAATATTATTGTTGATGCTAAGTCAGGTGTTAGTGGAGCAGGGCGAAGCGCGAAAGAAAATTTATTGTTTACTGAAGTAACCGAGGGAATGAACTCTTATGGTGTTACTCGGCATCGCCATGCTCCAGAAATCGAACAGGGACTCGCAGATGCTGCCGGTTCAAAAGTAACCATTAGTTTTACCCCACACCTGATACCAATGAGCCGTGGTATGCAATCAACTATTTATGTGGAAATGGCTCCAGGAGTAAAAACTGAGGACTTGTACCAACACCTGAAACAATCATATCAGGATGAAGAATTTGTTGTACTGTTGGAAAACGGTGTCATTCCTCGAACTCATAGTGTTAAAGGATCAAATTATTGTTTAATCAATGTTTTCCCCGACAGAATTCCTGGAAGAGCAATCATTATATCTGTGATTGATAACGTAGTGAAGGGAGCTTCTGGTCAAGCCTTACAAAATCTTAACTTGATAATGGGATTTCCAGAAAATTTGGGGCTCAATTACCTGCCTCTGTTTCCTTAA 1167 0.4087 MSATAFSSIFFNRAHSSNKDLIKQQNVKLRSKCSIKCGIATSQKNLRVGVLGASGYTGSEILRLLANHPHFGVALMTADRKAGQTISSVFPHLGTQNLPDLIAIKDADFSDVDAVFCCLPHGTTQEIIKGLPKHLKIVDLSADFRLRDVSEYEEWYGQPHRAPDLQKEAIYGLTEILREEIKNARLVANPGCYPTSIQLPLVPLIKANLIQTSNIIVDAKSGVSGAGRSAKENLLFTEVTEGMNSYGVTRHRHAPEIEQGLADAAGSKVTISFTPHLIPMSRGMQSTIYVEMAPGVKTEDLYQHLKQSYQDEEFVVLLENGVIPRTHSVKGSNYCLINVFPDRIPGRAIIISVIDNVVKGASGQALQNLNLIMGFPENLGLNYLPLFP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03852 388 Pfam Semialdehyde dehydrogenase, NAD binding domain 47 184 IPR000534 GO:0016620|GO:0051287
Vivi4g03852 388 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 42 388 - -
Vivi4g03852 388 ProSitePatterns N-acetyl-gamma-glutamyl-phosphate reductase active site. 187 203 IPR023013 GO:0003942
Vivi4g03852 388 Gene3D Dihydrodipicolinate Reductase; domain 2 190 356 - -
Vivi4g03852 388 Gene3D - 47 374 - -
Vivi4g03852 388 SMART Semialdhyde_dh_3 47 184 IPR000534 GO:0016620|GO:0051287
Vivi4g03852 388 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 192 356 - -
Vivi4g03852 388 FunFam N-acetyl-gamma-glutamyl-phosphate reductase 190 356 - -
Vivi4g03852 388 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 219 IPR036291 -
Vivi4g03852 388 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 46 382 IPR000706 GO:0003942|GO:0006526|GO:0070401
Vivi4g03852 388 NCBIfam N-acetyl-gamma-glutamyl-phosphate reductase 47 388 IPR000706 GO:0003942|GO:0006526|GO:0070401
Vivi4g03852 388 Pfam Semialdehyde dehydrogenase, dimerisation domain 201 359 IPR012280 GO:0008652|GO:0016620|GO:0046983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03852 K00145 - gmx:100801527 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03852 4 157852334 157858171 Vivi4g03852 4 157852334 157858171 ECH