Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03848 ATGGCTCCACCAAAGACGACGGCGCGTGCGATCTCACAAGAAGCCTTCAACGAGCTAGTAAACGAAAACATCGACGACCTCGGAATGGACCCAGCCGAAGCTCTCGAAGACGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGCATCGTGACTTCCGTTCCCGGAGAGAGCAATCCGGTGATAGAGTGCTTGGAAAAGCTGAAGCGGTTGGAGTCTGAATCGGATGCATTGGATGAGACGGTGGAAGCGTTTGATAAACTGGCGGAGTTGTGTGGCGGTGATGCTGGGAATGGCAATGCGGCTATTGCTACGAAAAATGGCGGCGTTGAATTGGTTTGTTCTAAGATTAATAGTGCTAATGGATCTCGACTTGTTCTTCTTTCTGCTTTAAATGCTTTATCGTCGATGCTTCGTGATGTTCAAAGTACAGGAATGTTCCAGAACAGTAACGGACCAAGGATTATACTTGGTATCTTAAATGACAACAAGCAAAATGTAGATGTATTAAATAACGGCTTCCGTGTTGTGGCTTCAGCTGCGGCTGGTGATGAGATTGTCAAGGAATCATTTATGGAATTGAAAGTTGATGAGTTAATTGTAGAGATAATGTCCACACATAAGAACCCTGGCATTCAAAGTTTATATGATGCTATTCGTGTACTTTTGACGCCTGATGACAATCGTGTTCTAGCTTCCCAAGTTTATGGATATGCACGGAAATTCGCTAAGATTGGAATTCCAGAAGCCATTGTGGATTCTCTGCACACAGGACTTGACTCACCTGACTTAATTTCAGCATGCATCACTTTAAAGGCCACTGCAGTAAATGATGAAATATGTAAATCCATTGCTGAAAAAGGGGGTATTGATGTAGTACTCAAATGTATAGACGACAGTGGAGAACAAGGCAACACAGATGTAGCCAAAGTTTGCTGCTCATTACTTTCAAAGTTAGCAGGAAGTGATGCAAACAAGAGTGCTATTGTCGGGAAAGGGGGTATGGATAAGCTAATCAAGCTTTCAGCCAGATATGCTGACGATCCTTCTGTTTTGCAAGAGATCATGTCTATTATTTCTGTGCTTTCTCTAAGATCTCCGGAAAATGCAGCCCGTGCCATTGAAGCTGGTGCTGGCGACCTTGCTATTCAAGCCATGCAGAAATTTCCTGCAGCACACCAAATGCAAAGAAACTCCTGTCTTATGATCAGAAATTTAGTAGCGAGAAACCAAGAGAACAGAACTATTCTTCTTAATAATGGAATTGAGAAATACATACGGAAAGCAAAGCAAACACATGCAAGTTGTAAGGAAGCTGCTACTGATGCCTTGAGGGATTTGGGGATTGACAGTTACAACTTGTAG 1371 0.4347 MAPPKTTARAISQEAFNELVNENIDDLGMDPAEALEDAIQTLTLQGVDLSGIVTSVPGESNPVIECLEKLKRLESESDALDETVEAFDKLAELCGGDAGNGNAAIATKNGGVELVCSKINSANGSRLVLLSALNALSSMLRDVQSTGMFQNSNGPRIILGILNDNKQNVDVLNNGFRVVASAAAGDEIVKESFMELKVDELIVEIMSTHKNPGIQSLYDAIRVLLTPDDNRVLASQVYGYARKFAKIGIPEAIVDSLHTGLDSPDLISACITLKATAVNDEICKSIAEKGGIDVVLKCIDDSGEQGNTDVAKVCCSLLSKLAGSDANKSAIVGKGGMDKLIKLSARYADDPSVLQEIMSIISVLSLRSPENAARAIEAGAGDLAIQAMQKFPAAHQMQRNSCLMIRNLVARNQENRTILLNNGIEKYIRKAKQTHASCKEAATDALRDLGIDSYNL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03848 456 SUPERFAMILY ARM repeat 79 435 IPR016024 -
Vivi4g03848 456 Coils Coil 63 90 - -
Vivi4g03848 456 SMART arm_5 324 366 IPR000225 GO:0005515
Vivi4g03848 456 SMART arm_5 368 410 IPR000225 GO:0005515
Vivi4g03848 456 SMART arm_5 412 451 IPR000225 GO:0005515
Vivi4g03848 456 SMART arm_5 279 323 IPR000225 GO:0005515
Vivi4g03848 456 Gene3D - 234 456 IPR011989 -
Vivi4g03848 456 Gene3D - 58 233 IPR011989 -
Vivi4g03848 456 PANTHER UNCHARACTERIZED 7 450 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03848 K24166 - gmx:100527792 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03848 4 157831250 157836411 Vivi4g03848 4 157831250 157836411 ECH