Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03620 ATGTCTAACACTACAAAGGTTTTGGATCCAGCATTCCATGGAGTGGGTCAAAGATTAGGAACTGAAATATGGAGGATTGAGAATTTTCAACCGGTTCCATTGCCCAAATCTGAATATGGGAAATTTTACATGGGAGATTCATACATCGTCTTGCAGACCACACAAGGCAAAGGAGGTGCTTATTTTTATGACTTACACTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCTGCCATTAAAGCTGTTGAACTTGACACAGCTCTTGGAGGACGAGCTGTGCAACACAGAGAGATTCAAGGACATGAATCTGACATTTTTTTGTCAAATTTTAGGCCATGTATCATACCATTGGAGGGGGGTGTTGCATCTGGATTTAGAAAACCTGAAGAGGAGGAGTTTGAAACACGGTTGTATGTATGCAGAGGGAAAAGAGTTGTCAGATTGAAACAGGTCCCGTTTGCAAGGTCTTCATTGAACCATGATGACGTGTTCATTCTTGACACCGACAATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTTTGGAAATTATACAGTTTCTGAAAGAAAAATATCATGAAGGAAAATGTGATGTTGCAATTGTTGATGATGGAAAGTTAGACACCGAGTCAGATTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGCAAAAAAGGTAATCAGTGAGGATGATATCATTCCAGAGGCAATTCCTGCTCAGCTGTATAGTATTGTTAATGGTGAAGTCAAGTCCGAGGAAGATGAACTTTCTAAGTCACTGCTGGAGAACAACAAATGCTATTTACTGGACTGTGGTTCTGAGATATTTATTTGGTTTGGCCGGGTAACACAAGTGGAAGAACGAAAAGCAGCTTGCCAGGCAGCTGAGGAGTTTGTTTCAAGCCAAAATAGGCCAAAATCTACAAGAATAACAAGGATCACTCAAGGTTTCGAGACACGTTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTGGTCCTGTCGTCGATGAGGGAAAGGGAAAAGTTACAGCATTGCTAAAGCAACAAGGGATGGGTGTCAAAGGAATGACAAAAAGTACCCCAGTAAATGAGGAAATTCCTAATTTGCTTGAAGAAGGTGGAAAGATGGAGGTATGGAGAATCAATGAAAGTGCCAAGACCTCATTGCCGAAGGAGGATATTGGCAAATTTCATAGTGGAGATTGTTACATTGTACTGTACACATACCATTCTGGTGAGAGGAAAGAAGATTACTTCTTGTGCTGCTGGTTTGGCAAAGACAGCATTGAGGAGGACCAAACACTGGCTTTGAAATTGGCTAATACAATGTCCAACTCTTTGAAGGGTAGACCTGTTCAGGGTCGCATATTTGAAGGTAAAGAGTCGCCACAATTTGTTGCTCTTTTCCAACCCATGGTAGTCCTTAAGGGAGGTTTGAGCTCTGGATATAAACAATTTGTAGCAGACAAAGGCTTATCAGATGAGACATACACGGAAGAATCTACTGCCCTTATCCGAATTTCTGGAACTTCCATCCATAATAATAAAGCAGTGCAAGTTGATGCAGTGCCATCCTCATTGAATTCTACCGAGTGTTTTGTCCTGCAATCTGGCTCTACAATTTTCATTTGGCATGGTAATCAGTGTTCCTTTGAACAGCAGCAGCTAGCAGCAAAGGTCGCAGAATTTCTAAGACCAGGAGTTGCTTTAAAGCATGCTAAAGAAGGTACAGAAAACTCAGCTTTCTGGCTTCCACTAGGAGGAAAACAAAGTTACACTAGCAAGAAAGTTGCTAATGAGGTTATCAGAGATCCACATCTATTCACCTACTCATTGTATAAAGGAAAGTTACATGTAGAGGAGGTTTACAACTTCTCCCAAGATGATTTGTTAACAGAGGATATCCACATACTGGATACACATGCAGAAGTGTTTGTTTGGATTGGTCAGTGTGTTGACCCAAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATACATAGATGTGGCTGCATCTCTGGAGGGACTATCTCCACGTGTACCCTTATATAAAGTAACAGAAGGGAACGAACCTTTCTTTTTCACATCATACTTTTCATGGGATTGGGATCATTCAAAAGCAAAGGTTCACGGGAACTCGTTCCAGAAAAACGTGACGTTACTCTTTGGGACTGGCCATGCCGTGGAGGAAAAATCAAATGGGTCAAGTGGACCAAGACAAAGGGCAGAGGCTTTGGCTGCTTTATCTTCTGCTTTTAGCTCATCGACTATGAAAACGAGTATGTCACAGGAGAGATTGAATGGGTTAAACCATGGAGGGCCAAGACAAAGAGCGGAAGCTTTAGCTGCTTTAAACTCTGCATTTAATTCTTCATCAACGACGAAGAGAGTTGCTCCTAAGCCACCTGGAAAAGGTCAAGGATCACAAAGAGCGGCCGCCTTGGCTGCTCTTTCATCAGTTCTTACTGCTGAAAAGAGCAAACAATCACCTGATTCATCTCCTGAGGCCAGCCACAGTCCAGAGAGTGACAATTTTGAAGTTAAAAATGGAAGTGAATATTCTGAAGTTGATGAAACTACTGAAGCCAAGGAAATGGAAGAAGTTTCCCCGCAATCTGGTAGCAATGAGGGTCTGGAATCTAGTCAAGAAAATGTGGAAGATGGAAATAATGACCAGAGTAGTCAAGGGACATTCAGTTATGATCAGTTAAAGACTACGTCTGGCAAAAATGTGCCTGGAATTGACCTTGAACGGCGAGAGGCTTATCTGTCAGACGAAGAATTCCAGACCGTATTTGGAATGGCAAAAGAAGCATTTTATAAATTGCCGAAATGGAAGAAAGACATGCTGAAAAAGAAATTTGAATTGTTCTAG 2931 0.4156 MSNTTKVLDPAFHGVGQRLGTEIWRIENFQPVPLPKSEYGKFYMGDSYIVLQTTQGKGGAYFYDLHFWIGKDTSQDEAGTAAIKAVELDTALGGRAVQHREIQGHESDIFLSNFRPCIIPLEGGVASGFRKPEEEEFETRLYVCRGKRVVRLKQVPFARSSLNHDDVFILDTDNKIYQFNGANSNIQERAKALEIIQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIAKKVISEDDIIPEAIPAQLYSIVNGEVKSEEDELSKSLLENNKCYLLDCGSEIFIWFGRVTQVEERKAACQAAEEFVSSQNRPKSTRITRITQGFETRSFKSNFDSWPSGSAGPVVDEGKGKVTALLKQQGMGVKGMTKSTPVNEEIPNLLEEGGKMEVWRINESAKTSLPKEDIGKFHSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQTLALKLANTMSNSLKGRPVQGRIFEGKESPQFVALFQPMVVLKGGLSSGYKQFVADKGLSDETYTEESTALIRISGTSIHNNKAVQVDAVPSSLNSTECFVLQSGSTIFIWHGNQCSFEQQQLAAKVAEFLRPGVALKHAKEGTENSAFWLPLGGKQSYTSKKVANEVIRDPHLFTYSLYKGKLHVEEVYNFSQDDLLTEDIHILDTHAEVFVWIGQCVDPKEKQNAFEIGQKYIDVAASLEGLSPRVPLYKVTEGNEPFFFTSYFSWDWDHSKAKVHGNSFQKNVTLLFGTGHAVEEKSNGSSGPRQRAEALAALSSAFSSSTMKTSMSQERLNGLNHGGPRQRAEALAALNSAFNSSSTTKRVAPKPPGKGQGSQRAAALAALSSVLTAEKSKQSPDSSPEASHSPESDNFEVKNGSEYSEVDETTEAKEMEEVSPQSGSNEGLESSQENVEDGNNDQSSQGTFSYDQLKTTSGKNVPGIDLERREAYLSDEEFQTVFGMAKEAFYKLPKWKKDMLKKKFELF 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03620 976 MobiDBLite consensus disorder prediction 885 928 - -
Vivi4g03620 976 CDD gelsolin_S2_like 138 232 - -
Vivi4g03620 976 CDD gelsolin_S4_like 387 487 - -
Vivi4g03620 976 FunFam Villin-4 248 354 - -
Vivi4g03620 976 SUPERFAMILY Actin depolymerizing proteins 383 529 - -
Vivi4g03620 976 CDD gelsolin_S1_like 12 124 - -
Vivi4g03620 976 FunFam Gelsolin 518 613 - -
Vivi4g03620 976 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Vivi4g03620 976 SMART VILL_6 139 234 IPR007122 GO:0051015
Vivi4g03620 976 SMART VILL_6 19 117 IPR007122 GO:0051015
Vivi4g03620 976 SMART VILL_6 624 719 IPR007122 GO:0051015
Vivi4g03620 976 SMART VILL_6 253 344 IPR007122 GO:0051015
Vivi4g03620 976 SMART VILL_6 518 607 IPR007122 GO:0051015
Vivi4g03620 976 SMART VILL_6 392 490 IPR007122 GO:0051015
Vivi4g03620 976 ProSiteProfiles Headpiece (HP) domain profile. 911 976 IPR003128 GO:0003779|GO:0007010
Vivi4g03620 976 MobiDBLite consensus disorder prediction 840 866 - -
Vivi4g03620 976 CDD gelsolin_S3_like 267 343 - -
Vivi4g03620 976 MobiDBLite consensus disorder prediction 774 794 - -
Vivi4g03620 976 FunFam Gelsolin 6 131 - -
Vivi4g03620 976 Gene3D Villin headpiece domain 898 976 IPR036886 GO:0003779|GO:0007010
Vivi4g03620 976 SUPERFAMILY Actin depolymerizing proteins 510 613 - -
Vivi4g03620 976 Gene3D Severin 133 246 IPR029006 -
Vivi4g03620 976 MobiDBLite consensus disorder prediction 807 933 - -
Vivi4g03620 976 FunFam Villin-like 1 132 247 - -
Vivi4g03620 976 SUPERFAMILY Actin depolymerizing proteins 223 347 - -
Vivi4g03620 976 PANTHER VILLIN 4 966 IPR007122 GO:0051015
Vivi4g03620 976 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Vivi4g03620 976 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Vivi4g03620 976 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Vivi4g03620 976 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Vivi4g03620 976 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Vivi4g03620 976 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Vivi4g03620 976 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Vivi4g03620 976 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Vivi4g03620 976 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Vivi4g03620 976 Gene3D Severin 6 132 IPR029006 -
Vivi4g03620 976 CDD gelsolin_S5_like 519 609 - -
Vivi4g03620 976 Gene3D Severin 520 613 IPR029006 -
Vivi4g03620 976 MobiDBLite consensus disorder prediction 774 788 - -
Vivi4g03620 976 SUPERFAMILY VHP, Villin headpiece domain 909 976 IPR036886 GO:0003779|GO:0007010
Vivi4g03620 976 Pfam Villin headpiece domain 941 976 IPR003128 GO:0003779|GO:0007010
Vivi4g03620 976 Pfam Gelsolin repeat 532 583 IPR007123 -
Vivi4g03620 976 Pfam Gelsolin repeat 150 217 IPR007123 -
Vivi4g03620 976 Pfam Gelsolin repeat 408 483 IPR007123 -
Vivi4g03620 976 Pfam Gelsolin repeat 639 710 IPR007123 -
Vivi4g03620 976 Pfam Gelsolin repeat 29 111 IPR007123 -
Vivi4g03620 976 Pfam Gelsolin repeat 266 337 IPR007123 -
Vivi4g03620 976 SUPERFAMILY Actin depolymerizing proteins 134 241 - -
Vivi4g03620 976 CDD gelsolin_S6_like 622 722 - -
Vivi4g03620 976 Gene3D Severin 253 350 IPR029006 -
Vivi4g03620 976 SMART VHP_1 941 976 IPR003128 GO:0003779|GO:0007010
Vivi4g03620 976 Gene3D Severin 383 519 IPR029006 -
Vivi4g03620 976 Gene3D Severin 614 736 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03620 Vivi-Chr4 154564054 154582699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03620 - - gmx:100788765 1543.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03620 4 154564054 154582699 Vivi4g03620 4 154564054 154582699 ECH
Vivi4g03620 4 154564054 154582699 Vivi4g03620 4 154564054 154582699 PCT