Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03604 ATGACGGTGACACCTAAGATATCGGTTGACAATGGGAATCTGGTGGTTCACGGGAAGACAATACTAAGTGGAGTTCCGGATAACATTGTGTTAACTCCTGGAACTGGAATTAATGGCGTTGTGACTGGTGCTTTTATTGGTGCTACTGTTTCCAACACCAAAAGCATCCATGTCTTTCCCATAGGTGTCTTACAGGATCTTCGATTCTTGTGTTGCTTCCGGTTCAAGTTATGGTGGATGACACATAGAGTAGGAACTTGTGGTAGAGATATCCCTTTGGAAACACAATTCATACTTATAGAGATCAAAGAAAGTAAAAATGAGGAGCAAAATTCTCCTGTCCTTTACACTGTCTTGCTTCCTTTATTGGAAGGCCAGTTCCGCGCTGTCCTACAAGGAAATGACAAAAATGAGATAGAGATTTGTCTTGAAAGTGGAGATCCTGCTGTGGAGACCAATCAAGGCCTTCACCTGGTCTACATGCACGCTGGAACTAACCCTTTTGAAGTCATCAGTCAAGCTGTCAAGGCTGTTGAAAAACACACGCAAACTTTTCTGCATCGTGAGAAGAAAAGATTGCCATCTTTCGTTGACTGGTTTGGCTGGTGTACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTATTGAGGAAGGATTGAAAAGCCTATCAGAGGGAGGCGCATCTCCTCGGTTCCTCATCATCGATGATGGTTGGCAACAGATTGAGAGTAAACCAAAAGACGCCGATTCTGTTGTACAAGAAGGAGCACAATTTGCGACAAGATTGACAGGTATTAAAGAAAACACTAAGTTTCAAAAGAATGGTGGGAATGGCCTGGAGCATGTTGTAGATCAAACAAAGCAACATCACAATATGAAGTATGTATATGTTTGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCTACAGCAATTGGAATGGAGCACTTCAACACTTGTGTGGCTTACCCTGTACACTCTCCGGGCGTTCTAGGAAATCAACCAGACGCAGTCATGGACAGTTTAACTATCCATGGCTTAGGTCTGGTTCATCCAAAGAAGGCCTTTGATTTCTACAATGAGCTCCATGCTTACTTAGCTTCGTGCGGAGTAGATGGAGTGAAAGTTGATGTGCAAAACATTATCGAGACCCTTGGTTCAGGACATGGTGGAAGAGTCTCAATCACACGTAGCTATCATCAAGCGCTTGAGGCCTCTATTGCTCGAAATTTTTGCGACAATGGATGTATTTCTTGCATGTGTCACAATACCGATGGCCTCTATAGTGCCAAACAGACTGCTGTTGTGAGAGCCTCCGATGACTTTTACCCACATGATCCTGCTTCTCATACCATTCATGTTTCATCGGTTACGTATAACTCAATTTTTCTTGGAGAGTTCATGCAACCTGACTGGGACATGTTTCATAGTTTACACCCGGCAGCCGAGTATCATGCTGCAGCTCGTGCAATCAGTGGAGGTCCAATTTATGTCAGTGATAAACCAGGAAGGCACAATTTTGATCTTCTGAAGAAACTGGTTCTTCCTGATGGCTCGGTCCTCCGTGCTCAGTTACCTGCCCGACCCACGGTTGACTCTCTCTTTGTTGATCCAGCAAGAGATGGGAAAAGCTTGCTCAAGATATGGAATTTGAACAAATGTTGTGGAGTTGTTGGTGTATTTAACTGTCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAAAATCGTATTCATTGTGAAACCCCTGGGACACTTAGTGGCTCTGTTTGTACTTCTGATGTTGATCTCATTGCTCAAGTAGCGGGTGCTGATTGGAATGGAGATGCTGTTGTCTATTCTTACAGATCAGGTAACATAATTCGGTTACCAAAGGGTGCTTCACTGCCAGTGACATTAAACGTTCTAGAATACGAGCTTTTCCATTTCTATCCAATCAAGGAAATCGCGCAAGGTATTTGGTTTGCGCCGATAGGGCTGTTGGATATGTTCAACACTGGAGGAGCTGTGGAACAGTTTGAAATCCATAAAAAATCAGTAGCTGCATCAGTTAGCCTAAAAGTAAGAGGGAGTGGAAGATTTGGGGTTTACAGTTCCCAGAGGCCAGTGAAGTGTGTGGTGGGTGATAATGAAAATGAGTTCAAGTATGAGTCAGAGAGTGGGTTGACAACTTTCTACATCCCAGTTTCAGATGAAGACATGTATAAATGGCCAATAGAGATAGAGTTTTGA 2238 0.437 MTVTPKISVDNGNLVVHGKTILSGVPDNIVLTPGTGINGVVTGAFIGATVSNTKSIHVFPIGVLQDLRFLCCFRFKLWWMTHRVGTCGRDIPLETQFILIEIKESKNEEQNSPVLYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDPAVETNQGLHLVYMHAGTNPFEVISQAVKAVEKHTQTFLHREKKRLPSFVDWFGWCTWDAFYTDVTAEGIEEGLKSLSEGGASPRFLIIDDGWQQIESKPKDADSVVQEGAQFATRLTGIKENTKFQKNGGNGLEHVVDQTKQHHNMKYVYVWHALAGYWGGVKPTAIGMEHFNTCVAYPVHSPGVLGNQPDAVMDSLTIHGLGLVHPKKAFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVSITRSYHQALEASIARNFCDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPHDPASHTIHVSSVTYNSIFLGEFMQPDWDMFHSLHPAAEYHAAARAISGGPIYVSDKPGRHNFDLLKKLVLPDGSVLRAQLPARPTVDSLFVDPARDGKSLLKIWNLNKCCGVVGVFNCQGAGWCKIEKKNRIHCETPGTLSGSVCTSDVDLIAQVAGADWNGDAVVYSYRSGNIIRLPKGASLPVTLNVLEYELFHFYPIKEIAQGIWFAPIGLLDMFNTGGAVEQFEIHKKSVAASVSLKVRGSGRFGVYSSQRPVKCVVGDNENEFKYESESGLTTFYIPVSDEDMYKWPIEIEF 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03604 745 SUPERFAMILY (Trans)glycosidases 195 521 IPR017853 -
Vivi4g03604 745 PANTHER - 1 741 IPR008811 -
Vivi4g03604 745 Gene3D Aldolase class I 199 516 IPR013785 -
Vivi4g03604 745 Pfam Raffinose synthase or seed imbibition protein Sip1 7 728 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03604 Vivi-Chr4 154277685 154282125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g03604 1 552 Glycoside Hydrolase AT3G57520 76.882 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03604 K06617 - gmx:100807861 1256.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03604 4 154277685 154282125 Vivi4g03604 4 154277685 154282125 ECH
Vivi4g03604 4 154277685 154282125 Vivi4g03605 4 154277718 154282125 PCT