Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03590 ATGGGAGAAGCACCAATTCTCATTCATCAAGACCAGCAGAATGGAACTAGTAATGCTTCTGAATTAAAAGACGGAACTTTCCAAACATCTACCACTGTCGGCAATAAAACGTATGTCATTGGTGGAGCTGATAATGAAACTCTGTCCATTGATGTTCGAGTTTTCGACAAGTGTCTCGGTGAATGGGTTAATCCAACTGTGCTAGGCACTAAACCCTTGTCATGCGAAGGCCACTCAGCAGTGTTATTGAAAGACCGAATCGTAGTTCTTAAGAAGAATCCTAAGCCAGATGATCATACTTGGTTTCTGGAGGTAGACACTCAATATGTGAGGCAACAGAAAAAGAAATTGGGGACTGAGGTTGTTGCATGGAGTAAGGGTGTGATAGGAAATGTTGAGAAACCTGTTGTTATTAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCAATGCTCATGAAGGAATTTCCATCCATGTTTGGTTTCTCTGTGAGCCACACAACCCGCGCCGCAAGAGGAATGGAGAAAGATGGAGTCCATTATCATTTTACTGACAAGAGTATTATGGAGAAAGAGATCGAAGACGGAAAGTTTCTCGAGTTTGCTTCTGTGCATGGTAATCTGTATGGGACCAGTGTCGAGGCTGTTGAAATGGTATCAGATGCAGGGAAAAGGTGTATTCTTGACATTGATGTTCAAGGGGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTATCTGTCCCCCGTCAATGGAAGAGCTGGAGAAGCGTCTTCGTGAAAGAGGAACGGAGACAGAAGAACAGATCCTAAAACGATTACGAAATGCTCAGGCTGAGATTGAGCAAGGGAAGTCATCAGGCATATTTGATTTCATCTTATACAATGACAAACTTGACGAGTGCTATGATAGTCTAAAGAAATTATTGGGACTTGATGGTTATGTCACTCCTCCACCTAATCCAGCTGCAAGAGAGTTCAATCTCCCAGTGGATTATTCAGTAACCAAACTTGATGACAAAATCATCATATACCGCAACTCTTTAGAACTAGAGAACATGATAATGTTAGACGTGTCCTCACTTAAAGGCGGTGCACCTGGTAGGACAAGAGGGCTGGATTTCGTTCGTATGGGACAACTTCACATTCGATGA 1167 0.4259 MGEAPILIHQDQQNGTSNASELKDGTFQTSTTVGNKTYVIGGADNETLSIDVRVFDKCLGEWVNPTVLGTKPLSCEGHSAVLLKDRIVVLKKNPKPDDHTWFLEVDTQYVRQQKKKLGTEVVAWSKGVIGNVEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAARGMEKDGVHYHFTDKSIMEKEIEDGKFLEFASVHGNLYGTSVEAVEMVSDAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLRERGTETEEQILKRLRNAQAEIEQGKSSGIFDFILYNDKLDECYDSLKKLLGLDGYVTPPPNPAAREFNLPVDYSVTKLDDKIIIYRNSLELENMIMLDVSSLKGGAPGRTRGLDFVRMGQLHIR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03590 388 NCBIfam guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Vivi4g03590 388 Gene3D - 130 317 IPR027417 -
Vivi4g03590 388 MobiDBLite consensus disorder prediction 1 22 - -
Vivi4g03590 388 SUPERFAMILY Galactose oxidase, central domain 22 113 IPR011043 -
Vivi4g03590 388 Gene3D - 10 114 IPR015915 GO:0005515
Vivi4g03590 388 Pfam Guanylate kinase 133 314 IPR008145 -
Vivi4g03590 388 FunFam Guanylate kinase 2 126 318 - -
Vivi4g03590 388 CDD GMPK 135 311 - -
Vivi4g03590 388 SMART gk_7 132 318 IPR008145 -
Vivi4g03590 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Vivi4g03590 388 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Vivi4g03590 388 PANTHER GUANYLATE KINASE-RELATED 28 321 - -
Vivi4g03590 388 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03590 Vivi-Chr4 154114067 154116977 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03590 K00942 - gmx:100812658 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03590 4 154114067 154116977 Vivi4g03590 4 154114067 154116977 ECH
Vivi4g03590 4 154114067 154116977 Vivi4g03590 4 154114067 154116977 PCT