Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03249 ATGGCATCATCGTTAGAGGGCGGCGCAGCAGCCTCACTGAAGACGGTGCTTGATCGCGTCCACCAGGCTGCCGATAGGTCAAACCGGAACGTCCAAGAAATCCGTGTAGTGGCGGCGAGTAAGACCAAGCCAGTTTCTGCTCTCCGGCAGGTGTATGATGCCGGTCACCGATTCTTCGGCGAGAATTACGTTCAGGAAATCATCGATAAAGCACCTCAGCTTCCGGAAGATATTGAATGGCATTTCATCGGTAATTTGCAGAGCAATAAAGTCAAGCCTCTCCTCGCTGGTGTTCCCAACCTTGCTTATGTAGAGACTATAGATGATGAGAAGATAGCAAACCTTCTTGATCGTGCTGTAGCCAAAATTGGCAGGAAACCATTGAAAGTTTTTGTTGAAGTGAATACAAGCGGAGAAACATCTAAATTTGGTGTTGAACCAGCACTGTGTCTAGACCTTGTAAAACATATTGTTGCAAATTGTCCAAACCTTGAATTCTGTGGCCTAATGACAATTGGCATGCTGGATTATTCATCCACCCCGGAAAATTTTAAGACATTATCCAAATGTAGAACTGAAGTATGTGAGGCAATTGGAATACCAGAAGCGCAATGTGAGCTATCAATGGATTGA 633 0.4518 MASSLEGGAAASLKTVLDRVHQAADRSNRNVQEIRVVAASKTKPVSALRQVYDAGHRFFGENYVQEIIDKAPQLPEDIEWHFIGNLQSNKVKPLLAGVPNLAYVETIDDEKIANLLDRAVAKIGRKPLKVFVEVNTSGETSKFGVEPALCLDLVKHIVANCPNLEFCGLMTIGMLDYSSTPENFKTLSKCRTEVCEAIGIPEAQCELSMD 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03249 210 NCBIfam YggS family pyridoxal phosphate-dependent enzyme 13 194 IPR011078 GO:0030170
Vivi4g03249 210 CDD PLPDE_III_YBL036c_euk 13 209 - -
Vivi4g03249 210 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 7 210 IPR011078 GO:0030170
Vivi4g03249 210 ProSitePatterns Uncharacterized protein family UPF0001 signature. 80 94 IPR011078 GO:0030170
Vivi4g03249 210 SUPERFAMILY PLP-binding barrel 10 209 IPR029066 -
Vivi4g03249 210 FunFam Pyridoxal phosphate homeostasis protein 1 210 - -
Vivi4g03249 210 Pfam Alanine racemase, N-terminal domain 26 194 IPR001608 -
Vivi4g03249 210 PIRSF YBL036c_PLPDEIII 2 210 IPR011078 GO:0030170
Vivi4g03249 210 Gene3D Alanine racemase 3 210 IPR029066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03249 Vivi-Chr4 146796202 146799138 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03249 K06997 - zju:107419867 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03249 4 146796202 146799138 Vivi4g03249 4 146796202 146799138 ECH