Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g03178 ATGTCTAGTGATGAGATTGATCCTGTTTTTGTGTCATGGGAGGAGCAAGTGATATGTCAAGAGCGTGGGAACCGAGTGATTCATTTTTACTTGAGACATGTGTCTGGGGATTCTGTGCTTGCGGTTGTTGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTTCCTCAACAGTTTTTGCAGGCTTATGGATCTATCAACCTAACTTATAAATGGAGGGCGAGGAGGGAGGTTGTGGACTGGCTTAATCATTTGGTTTCGAAGAATCATTCGCGTCGTGCAGATGCACTGCTGGATGGTTCAGAAAATGCTCTAGGACCAGGATCTTTTGATATGTACGCCAATAACAGAAAAATACCAGATAAACTGATTTCTAAGAAGCTGAAATTTCAAAGCTCGGATATTGAATGGTCAGGCAATGCTTGGTTTTGTGCTAAATCGCTGAAGCACTACACCGGGTTTGACAGGAAAGGGACAACCATATATGTTCATTCATTTGTATATATTATGGCTGAAGATGAAAATCCCTACCTTGGTTACTTGGAAGATATGTATGAAGACAAAAAGAAACAAAAAAGGGTCAAGGTAAGGTGGTTTCACCGCGGTCAGGAGGTTAAGCATGTGATTCCAGACCTTGATCTTGAAGAGGGTGAAGTTTTCATCACACCTAATGTTCAGGTGATCAGCGCCGAGTGCGTCAATGGGCCTGCAACAGTTCTGACTCCCAAGCATTATGAAAAATACAAAGCTGAGTTGCTGCCAAATACCTCTTTACCTGAGATTCATATATGCTTTAGGCAGCTTAAAAACAATAAGCTCAAACCCTTCGCACTTACTAAGCTGCGCGGTTATGGTAACCAGCCTATACTTTCGGGTTTGAACAGCCCTAGCCCTACTCTTTCCAAAAGAAAGACAAACTATCCAAAACTGGAAGATGGTGAGAACTTCACTCTAGATGATTCTTTGAGGTACGGCATTAAGAAAAATAGAAATTCTGTGGAGTATTTGGTGCCTGAAAATGGTTCGTCCGGTCTTCAATACTCTTCTCCTGTGAATGAGATGTCAAAAGGTGAACCGAAATACCCTAGTCTGAAACTAAAACTGTCGAAAACAATGGGTGTTAAGGTTATGGAACCGAAGCCTGAACCGCCTTTTAAGGTCAATGATAAGATTGAGTTTCTCTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTACAATCTTGTATGCATCTCAGAAGAAGCTGAAGGTCCAGTATGATGACCTGATGGACGCAGATGATGAAGGCCTACTCGAGGAATGGCTCCCTGCATCCAGAGTGGCAAATCCTGACAAACTGGGCATGCGTTATTATGGCCGTTTAACCGTACGACCACGCCCTCCTGAATTTACTAAAGGTTGTACATTTGAGGTTGGAGCAGCAGTGGATGCCTGGTGTGGTGACGGATGGTGGGAAAGTGTTATAACTGCTGTCGATGTTTCTGAAGTTGGAACTTATCGGCTGTATTCCCCTGGTGAGGAGAAGTATATGTTGGCCAAGAAGGACGAGATTCGGATTGCCCAAGATTGGATTGATGACAAGTGGGTTGATATATTGGGAAAGCCAGACATTTGCAGCATTATAGCTTCAAATACCGGTTCCCAGACCAAGCTGTCATCATCTAGCTCTGCAGTGGTCGATGGGTCAATGACTGGCAGTTCTGCAACATTAGAAAGTCCGTCGCCAGTTGCCAGAGTTGATGTTACTCCAAAGGTTGAGCAAGAATCATCTGGTTCCGAACCACTTCATTATGGCGGAATGAAGAGATTGACTTTGTGGAAACCACCGCTCCATGCCATTCATGAAGATGAGGATATCGACCCTTCTGGCTTTGATGCTGATACTGACGAAGCTGATGATGAACTACTCAAATCCAAGGACGACTCTGGCAGTAGCAGTGACGATGACGGCGGTGACGGTGATGGTGATGGCACTGACAACGACGGTGATGATGATGCTGACAACTCTGGAGACGACAGTGTGGATAATTTTTCAATGGATGAAAAATTTGACTGTTCTGAATCGAAACTCGATGCAGCAGGATCGGTACATGTTACATGA 2109 0.4419 MSSDEIDPVFVSWEEQVICQERGNRVIHFYLRHVSGDSVLAVVGTERSVRHMMYVVPQQFLQAYGSINLTYKWRARREVVDWLNHLVSKNHSRRADALLDGSENALGPGSFDMYANNRKIPDKLISKKLKFQSSDIEWSGNAWFCAKSLKHYTGFDRKGTTIYVHSFVYIMAEDENPYLGYLEDMYEDKKKQKRVKVRWFHRGQEVKHVIPDLDLEEGEVFITPNVQVISAECVNGPATVLTPKHYEKYKAELLPNTSLPEIHICFRQLKNNKLKPFALTKLRGYGNQPILSGLNSPSPTLSKRKTNYPKLEDGENFTLDDSLRYGIKKNRNSVEYLVPENGSSGLQYSSPVNEMSKGEPKYPSLKLKLSKTMGVKVMEPKPEPPFKVNDKIEFLCQDSGIRGCWFRCTILYASQKKLKVQYDDLMDADDEGLLEEWLPASRVANPDKLGMRYYGRLTVRPRPPEFTKGCTFEVGAAVDAWCGDGWWESVITAVDVSEVGTYRLYSPGEEKYMLAKKDEIRIAQDWIDDKWVDILGKPDICSIIASNTGSQTKLSSSSSAVVDGSMTGSSATLESPSPVARVDVTPKVEQESSGSEPLHYGGMKRLTLWKPPLHAIHEDEDIDPSGFDADTDEADDELLKSKDDSGSSSDDDGGDGDGDGTDNDGDDDADNSGDDSVDNFSMDEKFDCSESKLDAAGSVHVT 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g03178 702 MobiDBLite consensus disorder prediction 554 601 - -
Vivi4g03178 702 ProSiteProfiles BAH domain profile. 160 280 IPR001025 GO:0003682
Vivi4g03178 702 SMART agenet_At_2 384 449 IPR014002 -
Vivi4g03178 702 SMART agenet_At_2 470 528 IPR014002 -
Vivi4g03178 702 CDD Tudor_Agenet_AtDUF_rpt1_3 386 464 - -
Vivi4g03178 702 Gene3D - 127 275 IPR043151 -
Vivi4g03178 702 MobiDBLite consensus disorder prediction 619 702 - -
Vivi4g03178 702 MobiDBLite consensus disorder prediction 635 649 - -
Vivi4g03178 702 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 371 570 - -
Vivi4g03178 702 SMART BAH_4 160 280 IPR001025 GO:0003682
Vivi4g03178 702 MobiDBLite consensus disorder prediction 650 674 - -
Vivi4g03178 702 MobiDBLite consensus disorder prediction 554 576 - -
Vivi4g03178 702 Pfam Agenet domain 389 464 IPR008395 -
Vivi4g03178 702 Pfam BAH domain 161 253 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g03178 Vivi-Chr4 144493517 144499797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g03178 - - gmx:100816046 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g03178 4 144493517 144499797 Vivi4g03178 4 144493517 144499797 ECH