Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02938 ATGTCGCGACATCGTTATCCTATGGAAAGTTGTAGAATTTTTGAACGAACTACAACAACAAAGCTGCAGACAGCCCTAATGTCTTCAAAAGAAGGGGACGATGATGAGACTGTTAAGCCCAATGGAAATGGAACTGATGTTTCTAATGTAGAGAGAGAGAAGCAGGGATCCCGAAAAGGTGGGAAGTCACAGTCCACTTTAAAAATTGTTCTTGGGGAGGCACTTGGTTATGGACCTGCTCTTTCTGAACATATGATATTAGATGCTGGTTTGGTTCCCAGTGAAAAAGTGCCCAAAGATAAAACTTGGGATGATGCCACTGTTCAGGCTTTGGTTCAAGCTGTTGCAAAGTTTGAAGATTGGATGCAGGATATCATTTTAGGTGAACTAGTTCCTGAAGGATATATCTTGATGCAAAACAAAAATTTGGGGAAGGATTCTTCTATATCGCAACCAGAAAGTGTTAAACAGATCTATGATGAGTTCTGCCCCATTTTACTCAACCAGTTTAAATCAAGGGATCATACAAAGTTTGAGACATTTGACTTAGCTTTGGATGAATTCTACAGCAAAATTGAGAGTCAAAGGTCTGAACAACAGCACAAGGCCAAAGAAAACTCCGCTCTTCAGAAACTTAGTAAGATCCGCAACGATCAGGAAAATCGAGTGCACACTTTGAGGAAAGAAGCTGATCACTGTATTAAAATGGCAGAATTGATAGAATATAACTTAGAAGATGTGGATGCTGCTATATTAGCTGTTCGTGTATCTCTTGCGAAGGGTATGAGTTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGGAATCCAGTAGCTGGTCTTATTGACAAGCTCCATCTGGAAAGGAATTGCATGACTATACTGTTAAGCAACAATCTTGATGAAATGGATGATGATGAGAAGACACTCCCTGCTGATAAGGTTGAAGTTGATTTAGCTCTCTCAGCACATGCCAATGCTCGGAGGTGGTATGAACAGAAGAAAAAACAGGAGAGCAAACAGGAGAAGACTATAACTGCCCACGAGAAGGCTTTTAAAGCTGCAGAGAGAAAGACTCGCCTACAGCTTAGTCAGGAAAAAACTGTTGCCTCAATTTCGCATATGCGCAAAGTTCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAATTATTTGATTATCAGTGGACGTGATGCCCAGCAAAATGAGATGATAGTGAAGCGCTATATGTCAAAAGGAGATCTGTATGTGCATGCTGAACTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAACCTTTGCAGCCAGTTCCGCCACTGACCCTAAACCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCCAAAATGGTTACCAGTGCCTGGTGGGTTTATCCTCATCAGGTTAGTAAAACTGCTCCTACTGGGGAATATCTGACAGTTGGGAGTTTCATGATACGGGGTAAGAAAAATTTTCTTCCGCCACACCCTCTTATCATGGGTTTTGGCCTGCTATTTCGCTTGGATGAGAGTTCTTTGGGATCACATTTAAATGAAAGGAGAGTAAGAGGAGAAGAGGAAACAATAGATGATTATGTTGAAACTGGCCCTGTTGAAGAACAATCTGATTCAGAGTCTGAGAAGGATGTTACTGATGGAAAATCTGCTGCAGACTTGGAAAGGAATGATAATCTATCTGCAGGTTCACTCGTTCCCCCAACAGAAGACTTTCTTAAAGACTCGTCTCAAAATAGTTTGCCTACAACAATTAATGCCAAAACTGATGCCTCAGATGATTTCTCTGCCAAAGATACACGTACAACGAATATTCTTGATAGTAAGAAGTTGTCTGACATTGGTGGAAATGGCATAGCATCGGTCTCCCCTCAACTTGAGGAACTTATTGATCGAGCTCTGGGCCTTGGATCTGTTGCCAAATCAAATAAAAGTTATGGAGCTGAGAACACTCAGGTTGATATAAGCAGTGAGCACTTTATTGAACCGAGCAAACCTGCAGTAAGGGATAAACCATATATATCGAAAGCTGAGAGAAGAAAGCTTAAAAATGAACCGAAACATGGAGAAGCATATCCAAGTGTTGAACAGGGAAAGGACAAATTAAAAATAAAAGACACTTCTGGTAATCTGCATACAAAAGATGCTCAAAATTTGAAAACAAGTGTTGAACATGGAAAGGACGAAGTAAAAATAAAAGACATTTCTGGTAATCTGCATGCAAAAGATGCTCAAAATTTGAAGACAGGAGGTGGTAAAAAAACCAGCCGTGGACAGAAGGGAAAACTTAAGAAGATAAAGGAGAAGTATGCTGACCAAGACGAGGAAGAAAGGAAGATCCGAATGACATTATTGGCTTCTTCTGGAAAACCAATCAAGAAGGAAGAGACATCATCTGGAAATGAAGCATTGGATAAAGGGAAAAAGTCTGACAGTGGTCCTATAGACGCTCCAAAAATATGCTACAAGTGTAAGAAGTTAGGTCATTTATCTCGGGATTGTAAGGAGCAATCAAATGATCTGTTGCACAGTCATGCACCCAATGAAGCTGAAGAAAATCCCAACACGAGTGCTTCAAACACTTCCTTAGAAGATAGAGTGGCAATGGATGAAGATGATATTAATGAAATAGGAGAAGAAGAGAAAGAAAAACTAAATGACGTGGATTACTTGACAGGGAATCCACTCCCGAATGACATTCTCTTATATGCTGTTCCAGTATGTGGTCCATACAATGCAGTTCAGTCTTACAAGTACCGAGTGAAGATAATTCCTGGACCTGTGAAGAAAGGGAAAGCTGCAAAAACTGCAATGAACTTATTCAGCCACATATCAGAAGCAACAAATCGGGAGAAGGAGTTAATGAAAGCCTGTACCGATCCCGAATTGGTTGCTTCAATTGTTGGTAATGTGAAGATAACTGCAGCTGGACTTACTCAGTTAAAGCAAAAACAAAAGAAAGGAAAGAAGAGTGCCAAACAAGGAAGTTAG 3033 0.4059 MSRHRYPMESCRIFERTTTTKLQTALMSSKEGDDDETVKPNGNGTDVSNVEREKQGSRKGGKSQSTLKIVLGEALGYGPALSEHMILDAGLVPSEKVPKDKTWDDATVQALVQAVAKFEDWMQDIILGELVPEGYILMQNKNLGKDSSISQPESVKQIYDEFCPILLNQFKSRDHTKFETFDLALDEFYSKIESQRSEQQHKAKENSALQKLSKIRNDQENRVHTLRKEADHCIKMAELIEYNLEDVDAAILAVRVSLAKGMSWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTILLSNNLDEMDDDEKTLPADKVEVDLALSAHANARRWYEQKKKQESKQEKTITAHEKAFKAAERKTRLQLSQEKTVASISHMRKVHWFEKFNWFISSENYLIISGRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHKPLQPVPPLTLNQAGCFTVCHSQAWDSKMVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEETIDDYVETGPVEEQSDSESEKDVTDGKSAADLERNDNLSAGSLVPPTEDFLKDSSQNSLPTTINAKTDASDDFSAKDTRTTNILDSKKLSDIGGNGIASVSPQLEELIDRALGLGSVAKSNKSYGAENTQVDISSEHFIEPSKPAVRDKPYISKAERRKLKNEPKHGEAYPSVEQGKDKLKIKDTSGNLHTKDAQNLKTSVEHGKDEVKIKDISGNLHAKDAQNLKTGGGKKTSRGQKGKLKKIKEKYADQDEEERKIRMTLLASSGKPIKKEETSSGNEALDKGKKSDSGPIDAPKICYKCKKLGHLSRDCKEQSNDLLHSHAPNEAEENPNTSASNTSLEDRVAMDEDDINEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYNAVQSYKYRVKIIPGPVKKGKAAKTAMNLFSHISEATNREKELMKACTDPELVASIVGNVKITAAGLTQLKQKQKKGKKSAKQGS 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02938 1010 ProSiteProfiles Zinc finger CCHC-type profile. 835 850 IPR001878 GO:0003676|GO:0008270
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 852 882 - -
Vivi4g02938 1010 Pfam Zinc knuckle 834 850 IPR001878 GO:0003676|GO:0008270
Vivi4g02938 1010 Gene3D - 830 883 - -
Vivi4g02938 1010 SMART c2hcfinal6 834 850 IPR001878 GO:0003676|GO:0008270
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 862 878 - -
Vivi4g02938 1010 SUPERFAMILY Retrovirus zinc finger-like domains 831 853 IPR036875 GO:0003676|GO:0008270
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 809 827 - -
Vivi4g02938 1010 Pfam NFACT protein C-terminal domain 895 987 IPR021846 -
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 28 63 - -
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 550 568 - -
Vivi4g02938 1010 Pfam NFACT protein RNA binding domain 386 497 IPR008532 -
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 585 605 - -
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 692 714 - -
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 526 611 - -
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 779 797 - -
Vivi4g02938 1010 MobiDBLite consensus disorder prediction 755 827 - -
Vivi4g02938 1010 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 1 986 - -
Vivi4g02938 1010 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02938 Vivi-Chr4 137335021 137345481 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02938 K24971 - gmx:100807437 1567.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02938 4 137335021 137345481 Vivi4g02938 4 137335021 137345481 ECH