Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02929 ATGGATAAACTAGGAGATGGGGTTTTTCCAGATGAGGTGGTTATGCAGATTCTTGCTAGGTTACCAGTGAAATCGCTTTTTAGAAGCAAAAGTGTGTGCAAATTGTGGTATAGGTTGACTTTGGATAAGTATTTCATTCAATTATACAATGATGTTTCTAAGAAGAACCCTATGATTCTTGTTGAGATTTCAGATTCATTGTTGGAATCCAAATCTAGCTTAATCTGTGTTGATAGTTTAAGGGGTGTGTTTGAGTTTTCGCTCAATTTCTTGAACGATCGGGTTAAGGTTCGAGCATCGTGTAATGGGTTGTTGTGTTGTTCTAGTATTCCTGATATGGGTGTTTACTATGTTTGTAATCCGGTTACGCGGCAGTTTCGGTTGCTTCCTAAGAGTAGAGAGAGGCCGGTGACTCGGTTTTATCCGGATGGTGAAGCTACTTTGGTGGGGTTGGCATGTGATTCGGCGTTTCAGAAGTTCAATGTTGTGCTTGCGGGTAGTCATCGGACTTTTGGTCATAGGCCGGATGGGAAGTTCATATGTTTGGTGTTTGATTCGGAGTTGAACAAGTGGAGGAAGTTGATTTCTTTTCAAGATGAACATTTTACTCATATGAATAAGAATCAAGTTGTTTTTGTCAATAATGCGTTGCATTGGTTGACCGCTAGCTCGAGTTATGTGCTCGTGCTTGATTTAAGTTGTGATATTTGGAGGAAGATGTCGTTACCGTATGATCCAATTTGTGGAGCGGGGAATAGGACTTATTTATTGGAGTTAGACGGTTGTTTGTCTGTTATTCAAATTTCGGAAGCCTGGATGACTATATGGGTGCTGAAAGATTACTGGAACGATGAATGGTGCATCGTGGATAAGGTGAGTCTGAGGTGCATCAAAGGAATGGTGCCAGGCATTTTCCCGATCAGTCAGACGAGTGAATACGTTTTCATGGCAACTCATAAGCAGGTTTTGGTTTATCATCGCAGGAGTCATGTTTGGAAAGAAATGTACGCTGTGAAGTATAGCTCAACACTCCCGTTATGGTTTTCAGCACACGCGTATCGCAGCACAATGTTCTCTTGTAACTAA 1086 0.4134 MDKLGDGVFPDEVVMQILARLPVKSLFRSKSVCKLWYRLTLDKYFIQLYNDVSKKNPMILVEISDSLLESKSSLICVDSLRGVFEFSLNFLNDRVKVRASCNGLLCCSSIPDMGVYYVCNPVTRQFRLLPKSRERPVTRFYPDGEATLVGLACDSAFQKFNVVLAGSHRTFGHRPDGKFICLVFDSELNKWRKLISFQDEHFTHMNKNQVVFVNNALHWLTASSSYVLVLDLSCDIWRKMSLPYDPICGAGNRTYLLELDGCLSVIQISEAWMTIWVLKDYWNDEWCIVDKVSLRCIKGMVPGIFPISQTSEYVFMATHKQVLVYHRRSHVWKEMYAVKYSSTLPLWFSAHAYRSTMFSCN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02929 361 PANTHER BNACNNG10540D PROTEIN 9 339 - -
Vivi4g02929 361 CDD F-box_AtFBW1-like 8 45 - -
Vivi4g02929 361 SMART fbox_2 9 49 IPR001810 GO:0005515
Vivi4g02929 361 ProSiteProfiles F-box domain profile. 3 52 IPR001810 GO:0005515
Vivi4g02929 361 SUPERFAMILY F-box domain 8 51 IPR036047 GO:0005515
Vivi4g02929 361 Gene3D - 9 44 - -
Vivi4g02929 361 Pfam F-box-like 10 43 IPR001810 GO:0005515
Vivi4g02929 361 NCBIfam F-box protein interaction domain 100 325 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02929 Vivi-Chr4 136734734 136736424 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02929 - - gmx:100811223 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02929 4 136734734 136736424 Vivi4g02929 4 136734734 136736424 ECH