Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02928 ATGGCTAGGAAAGGTAGTCAGCAGAAGAATGGGATTAACCACAAAAAAGGTGTTTCTGGGGGTGTTCTTCCGGGTATGAAAGGTCATGAAGGAGGGCAAGTGAAGGTTTTTCCGGCGGAGGGACTTGCTGGCGACCGTGATCGTGAGCTTTCACAGAAAGCGTGTGAGTCTAGTTCTGCTGTTGATGACAATACCAATGAGCGAAAATCCGAGAAGTCTTCACGGAAAGTTAAGCAAGGGATGAATGCAAAGCATGGCCTGGAGGAATCACAATCGTTTGGGAGTAATTCAGAGAATGGCAGTGAGAATGGCGAAATTCCAGTACAAGAAGGAAATTGGAGTTTGCCTAGAAGTAATCAAGCTCAACAGAGTATCAAGAGTAGATTGTGCCATTTAGTGGAAGGTTTACAGTTGAGAAGTATGGTAGAAAATATGGAACTTGCTGATCATGCAGCTATTAGGAGATTAAGGTTGTCAGTATTTTCCATTTTCACCGCAGTTATGGAGTGGTCAGCCCGGCAGAAGCCGTTGTTTGTATCGTTTAGAACCACTGTTTTAGAAGGTTATGCTAGTTTGAGAACAAAATTTAAACAGGCATATCCCATTGTTCTGACGTGGCTCATGCACTTTGGAAACATAATCCTTCTATTATCGCTGTTTTGGTTGGACTGTGCCGTTCGGGGTATTGATTCGTTTGTACGGATGGGTACAACATCCTTCTTCTCTGTTATATGGTGCAGCATATTCTCCGTGATTAGTATGATTGGGATGTTCAAGTTTCTGGTTGTCCTGGGACTGGCTACCTTGATTGCGTATTTTGTCGGGTTCGTGCTTGCAATTTTGGTAGTTGCTATCATCGGAGTTGTTATGCTGTGGTTTTATGGTAGCTTCTGGACAACAGCATTTTTCATCATCCTTGGAGGATTGGCATTTATGTTACGGCATGAACGTGTGGCACTTCTTATCACCACCATCTATTCTGTCTATTGTGCTTGGCTGTACGTTGGGTGGTTTCGTTTGTTCATGGCTTTTAATTTAGCTTTCATCTCAAGTGATGTTCTGGTATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCGAATCCATTTGAGCAAAGAGCTGGAATGAACGGTCAACCAGGATTTAGAAATGATGAATCAATGCCTGCTTCATCCTCTGAAAATGGACCATCTACAGATCGAAATGCTGGAGTCCCTTCAACTAGTGGGGCTGATTCTGATGTAACTTCTGAAGATGAAGTTGTTCGATTGTTGAACTGCTCTGATCACTATTCAGCACTGGGCTTCCTACGCTATCAAAGTATAGATGTTTCAATTCTGAAGCGTGAATATAGAAAGAAGGCAATGTTGGTACATCCAGATAAAAATATGGGTAATGAAAAGGCCGTAGAAGCCTTTAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCTTTGAAGAGAAAAGCTTATGATGATGAGCTAAGGAGAGAAGAGATTCTTAATGTGTTCAATAGATTTCATAATGCTCCACGTAGGAATAGTAGACATGGGTTCTTTTCTTCCGGATTTGCCCATTCAGACGCAGATGGTGAGGACCCCTTTGGAGAATCAAGGCGAATAGCTTGCAAAAGGTGTGGTGGCTTTCATCTCTGGATACACACTAAGAAGCAAAAGTCTCGAGCAAGATGGTGCCAGGATTGTCAAGATTTTCACCAAGCCAAGGACGGTGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTTGACGCTCCTTCTGCTTACGTGTGTGCGGATAGCAAAATATTTGATGCCACTGAATGGTACATCTGTCAGGGTATGAGATGTCCAGCAAATACTCATAAGCCAAGTTTTCACGTGAACACCAGCATAATGACGAAACAAAATTCTACCAAAGGAGCAAGCTCTTCAACACCAAGGGGCGGGCGTATGCCAACACCTCCTAATATGCCAACACCTAATTTTGAAGAAACCATGACTGAGGAAGAATTCGTCGAGTGGTTACAAAATGCGGTACAGTCAGGCGCGTTTGACAATATGAGCGGCGGCACTGCAACAGAGAGCCCCTCTGCCAAATCTGGAAATGGGATGAAAAATCCATCTCCTGGCAACGGCGTCGGTAGCGGCAGCAAAAAAAAGAAGAAAGGAAAAAAGCAATGGTGA 2211 0.4301 MARKGSQQKNGINHKKGVSGGVLPGMKGHEGGQVKVFPAEGLAGDRDRELSQKACESSSAVDDNTNERKSEKSSRKVKQGMNAKHGLEESQSFGSNSENGSENGEIPVQEGNWSLPRSNQAQQSIKSRLCHLVEGLQLRSMVENMELADHAAIRRLRLSVFSIFTAVMEWSARQKPLFVSFRTTVLEGYASLRTKFKQAYPIVLTWLMHFGNIILLLSLFWLDCAVRGIDSFVRMGTTSFFSVIWCSIFSVISMIGMFKFLVVLGLATLIAYFVGFVLAILVVAIIGVVMLWFYGSFWTTAFFIILGGLAFMLRHERVALLITTIYSVYCAWLYVGWFRLFMAFNLAFISSDVLVYFLKKNIDQQSRSNPFEQRAGMNGQPGFRNDESMPASSSENGPSTDRNAGVPSTSGADSDVTSEDEVVRLLNCSDHYSALGFLRYQSIDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEILMDSLKRKAYDDELRREEILNVFNRFHNAPRRNSRHGFFSSGFAHSDADGEDPFGESRRIACKRCGGFHLWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCADSKIFDATEWYICQGMRCPANTHKPSFHVNTSIMTKQNSTKGASSSTPRGGRMPTPPNMPTPNFEETMTEEEFVEWLQNAVQSGAFDNMSGGTATESPSAKSGNGMKNPSPGNGVGSGSKKKKKGKKQW 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02928 736 SUPERFAMILY Chaperone J-domain 425 512 IPR036869 -
Vivi4g02928 736 SMART dnaj_3 429 489 IPR001623 -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 640 659 - -
Vivi4g02928 736 PRINTS DnaJ domain signature 452 467 IPR001623 -
Vivi4g02928 736 PRINTS DnaJ domain signature 469 489 IPR001623 -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 640 669 - -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 62 83 - -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 684 736 - -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 368 416 - -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 1 117 - -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 85 117 - -
Vivi4g02928 736 CDD DnaJ 430 486 IPR001623 -
Vivi4g02928 736 Pfam Cleavage inducing molecular chaperone 539 637 IPR032843 -
Vivi4g02928 736 ProSitePatterns Nt-dnaJ domain signature. 474 493 IPR018253 -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 688 722 - -
Vivi4g02928 736 ProSiteProfiles dnaJ domain profile. 430 497 IPR001623 -
Vivi4g02928 736 PANTHER OS03G0832900 PROTEIN 1 736 - -
Vivi4g02928 736 MobiDBLite consensus disorder prediction 385 416 - -
Vivi4g02928 736 Pfam DnaJ domain 430 494 IPR001623 -
Vivi4g02928 736 Gene3D DnaJ domain 418 510 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02928 Vivi-Chr4 136671136 136676956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02928 1 705 Miscellaneous Gene Families AT5G49580 51.117 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02928 K09534 - gmx:100789594 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02928 4 136671136 136676956 Vivi4g02928 4 136671136 136676956 ECH