Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02899 ATGGCCACTCTGAGATTTTTCTGCGCCACAAATATTTCCCTCTCAACTCAAAACACAGCCAAACCGGATAAGAAGTCTATTACTCAGAAGGTGAAGAACCTCCTCAACACTCTTGAATTTCCTTCCATTTCATCATCATCACCATCAACTCCACTTGAGTCTCTTCAAAGAGGTAATTGGGTGAAACTAATTTGTGGTGCAAGTTTTGAAGATGTTGTTGATATCAGAAATCTCAGTTTGGTTTACACTCTCGCTGGAGTTGACTGCATTGATTGTGCTGCTGATGCATCCGTTGTGAGTGCTGTGAATGAAGGAATTGAAGCTGCAAGAGACATCTTATGCGGCGGTAGAAAACCGTGGGTGATGATCAGTGTCAACGATGATAAAGATCTTCACTTTCGTAAAGCTCAATTTGATCCGGAGGACTGTCCAGCAAATTGTTCAAGGCCTTGTGAAATTGTCTGCCCAGCAAATGCAATCTCATTCCAACCGAATTCTGCTTCTCAAATTTCATATAATACCGAAGCACCAAGAGTAATGAAGGACGGTGTCATAACGGAACGCTGCTACGGCTGTGGTCGCTGCTTTCCAGTTTGTCCCTATGATAAAATAAGAGATGTAACATATGTTAGGGATGCTGTTACAACTGCTGATCTGATCAAGAAAAATGATGTTGATGCTATAGAGATACATACAAGTGGAAGGCAGAGTAGACAGTTTGAAGAACTCTGGTGTGCTTTAGGAGATTCAGTAGAAAACTTGAAGCTAGTAGCTGTTAGCTTACCTAATGTCGGAGATTCGACAATATCCTCTATGAACAAAATGTTCTCGATTATGAAGCCCAATCTTCAAGCCTACAACTTATGGCAGTTAGATGGCCGTCCGATGAGTGGAGATATTGGGAGAGGAGCAACTAAGGAGTCAATAGCCTTTGCTGTCCAATTGGCTAAAGCAAAAGATAGACCCTCTGGATTTCTTCAACTTGCTGGTGGAACTAATGCTTACACAATTGAAGGATTGAAAAAAGAAGGACTCTTTCAAACAACTATTACAGAATACTTGGATCATGAAGAGTCATCAAACAGTACATCAAATCCATCATCTGCTTTAATTAGCGGCATAGCTTATGGTGGCTACGCGCGAAAGATTGTTGGTAGAGTATTGAGATCCATGCAATCCCAGCATGGTGGAGCTGCGTCCATCGAGGATCATCCTGAGCATCTCTTATTGGCTTTAAGGGAAGCAGTTGCTTTGGTTGGACCTGTAAAATGTTGA 1275 0.4188 MATLRFFCATNISLSTQNTAKPDKKSITQKVKNLLNTLEFPSISSSSPSTPLESLQRGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAARDILCGGRKPWVMISVNDDKDLHFRKAQFDPEDCPANCSRPCEIVCPANAISFQPNSASQISYNTEAPRVMKDGVITERCYGCGRCFPVCPYDKIRDVTYVRDAVTTADLIKKNDVDAIEIHTSGRQSRQFEELWCALGDSVENLKLVAVSLPNVGDSTISSMNKMFSIMKPNLQAYNLWQLDGRPMSGDIGRGATKESIAFAVQLAKAKDRPSGFLQLAGGTNAYTIEGLKKEGLFQTTITEYLDHEESSNSTSNPSSALISGIAYGGYARKIVGRVLRSMQSQHGGAASIEDHPEHLLLALREAVALVGPVKC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02899 424 PANTHER PHOTOSYSTEM I IRON-SULFUR CENTER-RELATED 54 218 - -
Vivi4g02899 424 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 IPR017900 -
Vivi4g02899 424 Pfam Iron-Sulfur binding protein C terminal 219 420 IPR021039 -
Vivi4g02899 424 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 180 209 IPR017896 -
Vivi4g02899 424 Gene3D - 106 222 - -
Vivi4g02899 424 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 134 165 IPR017896 -
Vivi4g02899 424 SUPERFAMILY 4Fe-4S ferredoxins 110 205 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02899 - - gmx:100804088 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02899 4 135704711 135707827 Vivi4g02899 4 135704711 135707827 ECH