Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02896 ATGGCAGGTTCAAGGAGATTGGGTGTAGCCATGGATTTCTCTCCATGCAGCATCAAGGCTTTGCAATGGATGGTGGATAACATTGTTAGAGAAGGTGACACCATCATTCTTATTATCATTAATCCAGAAGAGTACGAACATGGTGAAATGCAGCTATGGGCTGTTACAGGTTCACCTCTCACACCTCTGGCCGAGTTCTCCGCTTCTGATTCTGTACTGTCAAAGAAATATGGAATCAATCCAAATCAAGAAGCGATTAAGATTTCCACAGCTGCTATAGAACAGAAAAAGGTTGCTGTACTTGTGAAGATCTATTGGGGAGATGCTCGTGAGAAATTATGTGAATCAATTGATCACATACCTCTTGATAGTCTTACCATGGGAAACAGAGGCCTTGGATCCCTCAGAAGGGCCATAATGGGGAGTGTCAGCAACTATGTAGTGAATAATGCAGCATGTCCCGTTACTGTGGTTAAGAGTTCGGACCATAACCACCATTAA 501 0.4311 MAGSRRLGVAMDFSPCSIKALQWMVDNIVREGDTIILIIINPEEYEHGEMQLWAVTGSPLTPLAEFSASDSVLSKKYGINPNQEAIKISTAAIEQKKVAVLVKIYWGDAREKLCESIDHIPLDSLTMGNRGLGSLRRAIMGSVSNYVVNNAACPVTVVKSSDHNHH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02896 166 CDD USP_Like 6 158 - -
Vivi4g02896 166 PRINTS Universal stress protein signature 119 131 IPR006015 -
Vivi4g02896 166 PRINTS Universal stress protein signature 4 22 IPR006015 -
Vivi4g02896 166 PRINTS Universal stress protein signature 137 159 IPR006015 -
Vivi4g02896 166 PANTHER IMP2'P 1 163 - -
Vivi4g02896 166 Pfam Universal stress protein family 5 159 IPR006016 -
Vivi4g02896 166 FunFam Universal stress protein family protein 1 162 - -
Vivi4g02896 166 Gene3D HUPs 3 166 IPR014729 -
Vivi4g02896 166 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02896 Vivi-Chr4 135649787 135651075 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02896 - - gmx:100816534 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02896 4 135649787 135651075 Vivi4g02896 4 135649787 135651075 ECH