Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02866 ATGACGCTATCACCGATGTCCCTATCTTCCTCCGGCACCTCCTACCCTGCCGCCATTTCGGGACCGCGCCACTGTCCCCTCTTTGACACCACCACTGCAACTGCCACGTCTTTCAATCTCCGATTCTGCGCTCTAAGGCGCGAAGCCTTCGCTTTCACTTCCATCCGCCATCGCTCAAAGCGTAACCATCCCATACGCTGGACACACTTCAATGCAATATCCGCCGCGCTTTCTGACAACAACACCTCTCCCAAATCATTCGATTACGATCTGCTTATTATCGGAGCTGGCGTCGGTGGTCACGGTGCCGCCCTTCACGCTGTTGAGAAGGGTTTGAAAACGGCAATTGTTGAGGGAGATGTGGTGGGAGGGACATGTGTGAACAGAGGTTGTGTTCCTTCTAAAGCTCTTTTGGCTGTAAGTGGTCGAATGCGAGAGCTGAGGAATGATCATCACTTGAAATCGCTGGGCTTACAGGTTTCTAATGCTGGGTATGATAGACAAGCTGTAGCTGACCATGCTAATAATCTTGCTTCGAAAATTCGCGGTAACTTGACCAGCTCGATGAAAGCACTTGGAGTGGATATACTCACTGGTTTTGGAACTATTTTGGGTCCTCAAAAGGTGAAAGTTGGCTCTTCCAACAATGTAGTAACTGCCAAAGACATCATCATTGCCACTGGTTCTGTTCCTTTTGTTCCTAAGGGAATTGAAGTCGATGGGAAGACTGTGATCACCAGTGACCATGCACTCAAATTGGAGACAGTTCCTGATTGGATAGCAATTGTTGGAAGTGGTTATATCGGCCTTGAATTCAGTGATGTATATACAGCCCTTGGAAGTGAGGTTACCTTTGTTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAGAGGGTTCTCATAAATCCCAGGAATATTGACTATCATACAGGCGTTTTTGCATCCAAGATCACTCCTGCAAGAGATGGAAAACCTGTAATGATTGAGCTCATTGATGCAAAGACCAAGGAACAAAAGGACACTTTAGAGGTGGATGCTGCATTAATAGCAACCGGAAGGGCTCCATTCACACAAGGTCTTGGATTGGAGAATATTGATGTTGCAACACAGCGTGGTTTTGTTCCCGTGGATGAGCGCATGAGAGTAATTGATGCAAATGGAAATCTGGTCCCTCATTTATACTGTATTGGCGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTTGAACAGGTCACTGGAAGAGATCATGTGCTCAATCATTTAAGCATACCAGCTGCATGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACAGAGCCTCAAGCAAGGGAGAAGGGTGAAAAGGAAGGGTTTGATGTAAGTGTGGCCAAAACAAGTTTTAAAGCTAACACAAAAGCCTTAGCAGAAAACGAAGGAGAGGGTCTTGCCAAGTTAATATACAGACCTGACAGCGGAGAGATACTAGGAGTTCATATTTTTGGGTTGCATGCTGCAGATCTCATCCATGAGGCTTCCAATGCAATAGCATTAGGGACACGCATTCAGGATATTAAATTTGCAGTTCATGCTCATCCAACTTTATCAGAGGTGCTTGACGAGCTATTTAAATCAGCAAAGGTTAAAGCATAA 1683 0.4563 MTLSPMSLSSSGTSYPAAISGPRHCPLFDTTTATATSFNLRFCALRREAFAFTSIRHRSKRNHPIRWTHFNAISAALSDNNTSPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRELRNDHHLKSLGLQVSNAGYDRQAVADHANNLASKIRGNLTSSMKALGVDILTGFGTILGPQKVKVGSSNNVVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLETVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVMIELIDAKTKEQKDTLEVDAALIATGRAPFTQGLGLENIDVATQRGFVPVDERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFDVSVAKTSFKANTKALAENEGEGLAKLIYRPDSGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKSAKVKA 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02866 560 Gene3D - 439 560 IPR016156 GO:0016491|GO:0050660
Vivi4g02866 560 FunFam Dihydrolipoyl dehydrogenase 439 560 - -
Vivi4g02866 560 Gene3D - 89 422 IPR036188 -
Vivi4g02866 560 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 439 553 IPR016156 GO:0016491|GO:0050660
Vivi4g02866 560 FunFam Putative dihydrolipoyl dehydrogenase 232 359 - -
Vivi4g02866 560 Pfam Pyridine nucleotide-disulphide oxidoreductase 89 421 IPR023753 GO:0016491
Vivi4g02866 560 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 440 551 IPR004099 -
Vivi4g02866 560 PANTHER DISULFIDE OXIDOREDUCTASE 85 556 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 436 457 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 353 367 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 401 408 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 90 112 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 122 137 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 223 232 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 505 520 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 259 284 - -
Vivi4g02866 560 PRINTS Pyridine nucleotide disulphide reductase class-I signature 527 547 - -
Vivi4g02866 560 PRINTS FAD-dependent pyridine nucleotide reductase signature 91 110 - -
Vivi4g02866 560 PRINTS FAD-dependent pyridine nucleotide reductase signature 259 277 - -
Vivi4g02866 560 PRINTS FAD-dependent pyridine nucleotide reductase signature 220 238 - -
Vivi4g02866 560 PRINTS FAD-dependent pyridine nucleotide reductase signature 352 368 - -
Vivi4g02866 560 PRINTS FAD-dependent pyridine nucleotide reductase signature 386 408 - -
Vivi4g02866 560 NCBIfam dihydrolipoyl dehydrogenase 89 557 IPR006258 GO:0004148|GO:0050660
Vivi4g02866 560 Gene3D - 232 359 IPR036188 -
Vivi4g02866 560 PIRSF Hg-II_reductase_MerA 45 553 IPR001100 GO:0016491
Vivi4g02866 560 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 123 133 IPR012999 GO:0016668
Vivi4g02866 560 SUPERFAMILY FAD/NAD(P)-binding domain 71 430 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02866 Vivi-Chr4 134897842 134904134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02866 4 560 Acyl Lipid Metabolism Gene Families AT3G16950 81.462 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02866 K00382 - gmx:100803176 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02866 4 134897842 134904134 Vivi4g02866 4 134897842 134904134 ECH
Vivi1g01045 1 22329547 22336916 Vivi4g02866 4 134897842 134904134 PCT