Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02856 ATGAATTCCAAATGGATCTTTTTTCTACTAACCATTTCAACAATGTTTGTAATAGGAACAACACAATCAGTATCATCAGAGAAACCATTGGTGAAAACAGTTAGGGGAAAAAAACTATGTGACAGAGGGTGGGAATGTAAGGGTTGGTCAGTGTATTGTTGCAATGAGACTATCTCTGATTATCTTCAAACGTATCAGTTTGAGAATTTGTTCTCAAAGAGGAATGATCCAACGGCGCATGCGGTTGGATTTTGGGATTATCGTTCTTTTATTACTGCTGCTGCACTTTATCAGCCTCTTGGGTTTGGTACCTCTGGTGGAAAACATGGTGGACAGAAAGAAGTTGCTGCTTTTCTTGGTCATGTTGGAAGCAAAACCTCTTGTGGTTATGGTGTAGCTACTGGAGGACCCATGGCATGGGGATTATGCTATAATAAGGAGTTGAGTCCTGATCAATTTTATTGTGATGACTACTACAAGTTAACCTATCCATGTAGTCCTGGCGCAGCATACTATGGCCGCGGCGCCATACCAATTTACTGGAATTACAACTATGGAAAAATTGGGGAAGCCTTAAAGGTGGATCTATTAAACCATCCAGAATACATAGAACAAAATGCAACATTGGCATTCCAAGCAGCACTATGGAAATGGATGACACCACCTGAAAAGCACATACCATCAGCCCATGATGTTTTTGTTGGAAACTGGAAACCAACAAAAAATGACACTTTGTCCAAAAGGGTACCTGGATTTGGTGCCACAATCAATGTTCTATATGGTGATCAAGTTTGTGGCCAAGGTTCTGATAATGATGGAATGAATAACATAATTTCTCATTATCTTTATTACCTTGATTTGTTGGGAGTTGGTAGAGAAGAGGCAGGGCCTAATGAAGTTCTCTCTTGTGCTGAACAAGCTGCTTTTAAACCCTCTGGACCTCCTTCTTCTTCAACAACTTGA 963 0.4029 MNSKWIFFLLTISTMFVIGTTQSVSSEKPLVKTVRGKKLCDRGWECKGWSVYCCNETISDYLQTYQFENLFSKRNDPTAHAVGFWDYRSFITAAALYQPLGFGTSGGKHGGQKEVAAFLGHVGSKTSCGYGVATGGPMAWGLCYNKELSPDQFYCDDYYKLTYPCSPGAAYYGRGAIPIYWNYNYGKIGEALKVDLLNHPEYIEQNATLAFQAALWKWMTPPEKHIPSAHDVFVGNWKPTKNDTLSKRVPGFGATINVLYGDQVCGQGSDNDGMNNIISHYLYYLDLLGVGREEAGPNEVLSCAEQAAFKPSGPPSSSTT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02856 320 Gene3D - 66 309 - -
Vivi4g02856 320 Gene3D Endochitinase, domain 2 146 205 - -
Vivi4g02856 320 CDD chitinase_GH19 66 303 - -
Vivi4g02856 320 PANTHER CHITINASE-RELATED 9 306 - -
Vivi4g02856 320 SUPERFAMILY Lysozyme-like 58 309 IPR023346 -
Vivi4g02856 320 PIRSF Endochitinase 1 310 IPR016283 GO:0004568|GO:0005975
Vivi4g02856 320 FunFam Endochitinase (Chitinase) 145 205 - -
Vivi4g02856 320 Pfam Chitinase class I 65 293 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02856 Vivi-Chr4 134799871 134801914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02856 23 309 Glycoside Hydrolase AT3G16920 81.533 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02856 - - gmx:100805300 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02856 4 134799871 134801914 Vivi4g02856 4 134799871 134801914 ECH