Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02855 ATGCCTCATCACAAAACCTTCATAATAACCATACTACTACTAATCCTCACACTATCACCACTAATTCAAGGACGAGTTCCCTTTGCATGTGATCCAGCAAACGGTTTCACAAGAGGCTACAGATTCTGCAACATAAACATTCCGATTCACGTTAGAGTCCAAGACCTTATTGCGAGACTTACATTACCTGAGAAAATAAGACTTGTTGTTAACAATGCAATTGCAGTTCCAAGACTTGGGATACAAGGATATGAGTGGTGGTCGGAGGCTTTACACGGCGTTTCTAACGTCGGTCCCGGGACTAAATTCGGTGGCGCTTTTCCTGGCGCCACCAGTTTTCCTCAAGTTATTACAACCGCTGCTTCTTTTAATCAGTCCTTGTGGCTCGAAATTGGACGGGTTGTGTCTGATGAAGCAAGAGCAATGTACAATGGTGGAGCAGCAGGGTTGACTTATTGGAGTCCTAATGTAAATATTTTCCGCGATCCACGATGGGGCCGAGGCCAAGAGACACCCGGTGAAGACCCCGCGTTGGCCGCAAAATATGCGGCCGCCTATGTTCAAGGACTACAAGGCAATGGCGCGGGTAACCGGCTCAAGGTTGCAGCTTGCTGTAAACACTACACTGCCTATGATCTTGATAATTGGAATGGTGTAGACAGGTTTCATTTCAATGCCAAGGTGAGTAAACAGGACTTGGCAGACACATATGATGTACCATTCAAGGCATGTGTGTCTGAAGGGAAGGTGGCGAGTGTAATGTGTTCCTACAATCAAGTCAATGGCAAGCCCACTTGTGCTGATCCCGAACTTCTTCGCAACACCATCCGTGGTGAATGGCGTCTCAATGGGTACATAGTTTCAGACTGTGACTCAGTCGGAGTTTTCTACGACACCCAACATTACACGAGAACACCCGAAGAGGCTGCAGCCGATGCGATTAAAGCGGGTTTGGATTTGGATTGTGGCCCATTTTTAGCCCTACATACTGATGGTGCTATTAGGCAAGGACTTATGTCTGAAAATGACCTTAACAATGCTTTAGCTAACCTTGTTACAGTTCAAATGAGATTGGGCATGTTTGACGGTTTGGCCCAACCATATGGGAACTTAGGCCCAAGAGATGTTTGTTTACCGGCCCATAATGAACTTGCAGTTGAAGCAGCTAGACAGGGCATTGTTCTTCTGCAAAACAAAGGAAATGCATTGCCTTTATCCCCTACACGCTTCCGCAACATAGGAGTCATTGGTCCCAATTCTGATGTAACTGTTACAATGATTGGAAACTATGCAGGTGTGGCGTGTGGCTATACAACGCCGTTGCAAGGTATTGCCAGATATGCGAAGACTATTCATCAAGTAGGATGTAGGGATGTGAGTTGTGTTGGGAACCAGCTATTTGGGGAGGCAGAGATAGTAGCAAGACAAGCTGATGCAACAGTATTAGTAATGGGCTTAGATCAGTCCATAGAAGCTGAATTTAGAGATAGAGTTGGGCTTCTTTTACCAGGCCATCAACAAGAGCTAGTGTCTAGAGTAGCTAGGGCTGCAAGAGGCCCAGTTATATTGGTCATCATGTCTGGTGGGCCTATTGATGTTACATTTGCTAAAAATGATCCCAAAATTAGTGCTATTTTGTGGGTTGGTTATCCTGGGCAATCTGGAGGAACTGCTATTGCTGATGTTATCTTTGGCAGAACCAACCCAAGTGGGAGGTTACCCAATACATGGTACCCACAAGGTTATTTGAGCAAAGTGCCAATGACAAACATGGACATGCGTCCAAACCCGGCAATAGGGTACCCAGGAAGAACCTACAGATTCTACAAGGGCCCGGTAGTATTCCCATTTGGGCATGGGCTAAGTTACTCAAGATACACTCACAGCTTAGCACTTGCTCCTAAACAAGTCTCAGTCTCTTATGTATCCCTCCAGGCCCAAGCCTTCACAAACTCAAGTAACAAAGGAATAAAAGTGAGTCATGCAAAATGTGATGAATTGGAAGTAGGTTTCCATGTGGATGTGAAAAATGAAGGGACAATGGATGGAGCCCACACACTTCTAATATTCTCAAAACCACCTAATGGGGTTAAACAATTGGTGAACTTTCATAAGACTTATGTTCCTGCTGGATCAAAGACACGGGTTAAGGTTGGTGTTCATGTTTGTAACCATCTCTCTGTTGTCGATGAGTTTGGGGTTCGAAGAATCCCAATTGGTGAACATGAACTTCACATTGGTGATCTCAAACATTCTATTTCGGTTCAAACTTTGGACCAAATTATACATTAA 2292 0.4481 MPHHKTFIITILLLILTLSPLIQGRVPFACDPANGFTRGYRFCNINIPIHVRVQDLIARLTLPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATSFPQVITTAASFNQSLWLEIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQETPGEDPALAAKYAAAYVQGLQGNGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLADTYDVPFKACVSEGKVASVMCSYNQVNGKPTCADPELLRNTIRGEWRLNGYIVSDCDSVGVFYDTQHYTRTPEEAAADAIKAGLDLDCGPFLALHTDGAIRQGLMSENDLNNALANLVTVQMRLGMFDGLAQPYGNLGPRDVCLPAHNELAVEAARQGIVLLQNKGNALPLSPTRFRNIGVIGPNSDVTVTMIGNYAGVACGYTTPLQGIARYAKTIHQVGCRDVSCVGNQLFGEAEIVARQADATVLVMGLDQSIEAEFRDRVGLLLPGHQQELVSRVARAARGPVILVIMSGGPIDVTFAKNDPKISAILWVGYPGQSGGTAIADVIFGRTNPSGRLPNTWYPQGYLSKVPMTNMDMRPNPAIGYPGRTYRFYKGPVVFPFGHGLSYSRYTHSLALAPKQVSVSYVSLQAQAFTNSSNKGIKVSHAKCDELEVGFHVDVKNEGTMDGAHTLLIFSKPPNGVKQLVNFHKTYVPAGSKTRVKVGVHVCNHLSVVDEFGVRRIPIGEHELHIGDLKHSISVQTLDQIIH 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02855 763 PANTHER SUGAR HYDROLASE-RELATED 22 753 IPR044993 GO:0009044|GO:0045493
Vivi4g02855 763 FunFam probable beta-D-xylosidase 7 52 367 - -
Vivi4g02855 763 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 393 626 IPR036881 GO:0004553|GO:0005975
Vivi4g02855 763 Gene3D - 52 367 IPR036962 GO:0004553|GO:0005975
Vivi4g02855 763 Gene3D Immunoglobulins 648 762 IPR013783 -
Vivi4g02855 763 Gene3D - 379 624 IPR036881 GO:0004553|GO:0005975
Vivi4g02855 763 Pfam Fibronectin type III-like domain 696 748 IPR026891 -
Vivi4g02855 763 FunFam probable beta-D-xylosidase 2 378 624 - -
Vivi4g02855 763 SUPERFAMILY (Trans)glycosidases 41 392 IPR017853 -
Vivi4g02855 763 PRINTS Glycosyl hydrolase family 3 signature 201 217 IPR001764 GO:0004553|GO:0005975
Vivi4g02855 763 PRINTS Glycosyl hydrolase family 3 signature 113 132 IPR001764 GO:0004553|GO:0005975
Vivi4g02855 763 PRINTS Glycosyl hydrolase family 3 signature 275 293 IPR001764 GO:0004553|GO:0005975
Vivi4g02855 763 SMART Fn3_like_2 685 750 IPR026891 -
Vivi4g02855 763 Pfam Glycosyl hydrolase family 3 C-terminal domain 393 623 IPR002772 GO:0004553|GO:0005975
Vivi4g02855 763 Pfam Glycosyl hydrolase family 3 N terminal domain 107 324 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02855 Vivi-Chr4 134734383 134739927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02855 4 756 Glycoside Hydrolase AT5G49360 72.005 0.0 1127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02855 - - gmx:100812823 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02855 4 134734383 134739927 Vivi4g02855 4 134734383 134739927 ECH