Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02744 ATGGCATCCGCTCAACATTTCAGCCACGACTCTCTCCTCCGATATTGCTCTTCCAACGTTTCTGACTTCCCTCTTTCCCCCACTCATTTCAATCTCTCCCAGTTTGGACATGGACAGTCTAATCCAACATACTTGATGGAAGTTGGTTCAAATGGATCTGCGGTGAAGAAATATGTTCTCAGGAAAAAGCCTCCTGGCAAATTGTTGGCTTCAGCTCATGCTGTTGAAAGAGAGTTTCTGGTTCTCCAGGCTATAGGCAATAATACCAAAGTTCCAGTTCCCAAAGTTTTATGTTTGTGCAATGATCCAACTGTTATTGGAACAGCATTTTATATTATGGAGTATTTGGAAGGACGGATATTCTTTGATCCTAAATTACCGGGTCTGTCAGCAGAGAGTAGGAGGGCAATTTATCGCGAAACTGCTAAGACCTTAGCTTCACTACATTCTGTTAATGTGGATTCCATTGGTCTTGGAAATTACGGGCGACGCAATGATTATTGCAGAAGACAGATTGAGAGATGGGGTCAGCAATATGTGTCTTCAACCAATGAGGGTAAACCTGCAAGCAATCCGAAAATGTTTGCGTTGATTGATTGGCTACGAAATCATATCCCTTCTGAAGATTCTTCTGGAGCAACAGCTGGTTTGGTTCATGGAGATTTTCGCATTGACAATCTTGTGTTCCATCCCACAGAGGATCGAGTAATCGGTGTTCTTGACTGGGAACTATCTACCCTTGGAAACCAAATGTGTGATGTTGCATATATCTTAATGTCTTATATTAAAGATGTTGGGCCAGAAAAAGTGAAGGAAGGTATGGAACGTTCGGGATTACCAGCGGGAATTCCATCGCTACCAGAATTTTTGGCTGAATATTGCTCTCTGGCAGGAAGAAAATGGCCTGTTGCTGAATGGAAGTTCTATGTCGCCTTTTCTTTTTTCCGCGGGGCTTCTATTTATGCCGGAGTGTATAATAGATGGGTTAAGGGCAATGCATCTGGTGGTGAGCGTGCTCGTTACACAGAAGTACTTGCTAATGGCCTTATTGATGCTGCTTGGGAATTTATTGAACGCAAAATTGTGCTTCCCGAGCGTCCTCCATCAGGTGTGAATGCGAAAGAGTTAGTGAAGCGTAATGATACGCAGGACCTCCCAAATGAAGGGAGGTTTGCTCTTAGGCAAGAGGTTATAGTGCTGAGGAATAAAATAGTTAAGTTCATTGAGGAACATGTATACCCCCTCGAAGACGAATTCGCTAAACTTGCTCATTCAGACGCACGTTGGACTATTCACCCAGCCGAGGAAAAATTGAAGGAGTTAGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTGTTGATAGTGCTGCGAGGGCAAAAAAAATTCTATTTGATGGGAGCATTAATAATCTTTCTACTGATTCAAATGACTTGTTGTTGGGTGCTGGTTTAACAAATCTCGAATATGGATACTTGTGTGAGTTCATGGGCCGTTCTGTTTGGGCTCCACAAATATTTAACTGTGGTGCGCCAGACACTGGTAATATGGAGGTTTTATTGCGCAATGGAAATAAAGAACAAATGCTAAAATGGCTTATTCCTTTGCTTGAGGGGAAGATTAGGTCTGGGTTTGCTATGACAGAACCACAAATTGCATCTTCTGATGCAACTAATATTGAGTGCGCAATAAAAAGGCAAGGAGATTCATATATTATAAATGGGACTAAATGGTGGACTAGTGGTGCCATGGATCCAAGATGCAAAATTCTCATACTCATGGGGAAAACTGACTTCAATGCGCCGAGGCATAAACAACAATCGATGATCTTAGTGGATCCTCAGACTCCTGGTGTTCACATTAAGAGAGCTTTGACAGTGTTTGGCTTTGACGACGCACCTCATGGACACGCAGAAATAGTATTTGATAATGTTCGCGTGCCTGCCACAAATATCTTAATGGGCGAAGGACGTGGATTTGAGATCGCTCAAGCTCGGCTAGGTCCTGGAAGGCTGCACCATTGTATGAGATTGATAGGCGCTGCCGAGCGAGGCATGCAACTGATGGCTCACAGGGCTCTTAGTAGGAAAGCTTTTGGGAAAATGATTGCTCAACATGGCTCATTTATTTCGGATTTGGCCAAGTGCCGAGTCGAGCTAGAGAAGACTAGATTACTTGTGTTGGAAGCCGCAGACCAGCTTGATCGATATGGAAACAAAAAAGCTCGAGGGATAATCGCAATGGCTAAGGTAGCCGCACCACAAATGGGATTAATGGTACTTGACATGGCAATCCAAGTGCATGGAGCGGCTGGTGTATCATCTGACACTGTCCTATCACATCTGTGGGCAACCGCAAGGACATTGAGAATCGCTGACGGCCCGGATGAAGTTCACTTAGGTACCATAGGCAAGCTAGAATTAGAAATACAAAGAGCCAAGCTTTGA 2448 0.4371 MASAQHFSHDSLLRYCSSNVSDFPLSPTHFNLSQFGHGQSNPTYLMEVGSNGSAVKKYVLRKKPPGKLLASAHAVEREFLVLQAIGNNTKVPVPKVLCLCNDPTVIGTAFYIMEYLEGRIFFDPKLPGLSAESRRAIYRETAKTLASLHSVNVDSIGLGNYGRRNDYCRRQIERWGQQYVSSTNEGKPASNPKMFALIDWLRNHIPSEDSSGATAGLVHGDFRIDNLVFHPTEDRVIGVLDWELSTLGNQMCDVAYILMSYIKDVGPEKVKEGMERSGLPAGIPSLPEFLAEYCSLAGRKWPVAEWKFYVAFSFFRGASIYAGVYNRWVKGNASGGERARYTEVLANGLIDAAWEFIERKIVLPERPPSGVNAKELVKRNDTQDLPNEGRFALRQEVIVLRNKIVKFIEEHVYPLEDEFAKLAHSDARWTIHPAEEKLKELAKKEGLWNLWIPVDSAARAKKILFDGSINNLSTDSNDLLLGAGLTNLEYGYLCEFMGRSVWAPQIFNCGAPDTGNMEVLLRNGNKEQMLKWLIPLLEGKIRSGFAMTEPQIASSDATNIECAIKRQGDSYIINGTKWWTSGAMDPRCKILILMGKTDFNAPRHKQQSMILVDPQTPGVHIKRALTVFGFDDAPHGHAEIVFDNVRVPATNILMGEGRGFEIAQARLGPGRLHHCMRLIGAAERGMQLMAHRALSRKAFGKMIAQHGSFISDLAKCRVELEKTRLLVLEAADQLDRYGNKKARGIIAMAKVAAPQMGLMVLDMAIQVHGAAGVSSDTVLSHLWATARTLRIADGPDEVHLGTIGKLELEIQRAKL 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02744 815 Gene3D - 658 813 - -
Vivi4g02744 815 Pfam Acyl-CoA dehydrogenase, N-terminal domain 400 540 IPR013786 GO:0016627|GO:0050660
Vivi4g02744 815 Pfam Acyl-CoA dehydrogenase, C-terminal domain 657 805 IPR009075 GO:0016627
Vivi4g02744 815 Gene3D Phosphorylase Kinase; domain 1 9 117 - -
Vivi4g02744 815 SUPERFAMILY Protein kinase-like (PK-like) 25 332 IPR011009 -
Vivi4g02744 815 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 655 809 IPR036250 GO:0016627
Vivi4g02744 815 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 391 670 IPR009100 GO:0016627
Vivi4g02744 815 Pfam Acyl-CoA dehydrogenase, middle domain 544 645 IPR006091 GO:0016627
Vivi4g02744 815 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 70 809 - -
Vivi4g02744 815 FunFam Acyl-CoA dehydrogenase fadE12 543 661 - -
Vivi4g02744 815 Pfam Phosphotransferase enzyme family 33 278 IPR002575 -
Vivi4g02744 815 Gene3D - 394 541 IPR037069 GO:0016627|GO:0050660
Vivi4g02744 815 Gene3D - 118 361 - -
Vivi4g02744 815 CDD ACAD10_11_N-like 31 297 IPR041726 -
Vivi4g02744 815 Gene3D - 543 657 IPR046373 GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02744 Vivi-Chr4 130439415 130445318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02744 1 813 Acyl Lipid Metabolism Gene Families AT3G06810 72.917 0.0 1242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02744 K00249 - gmx:100778771 1378.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02744 4 130439415 130445318 Vivi4g02744 4 130439415 130445318 ECH