Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02729 ATGTCATTACTCTTGATGAGGACGGTATTCTGGAAGAAAACAAGAGGAAGTGGTGGTCGGAGTGATAGAGGTGATGGAGATAGATCACAATTGCCTATGATTGCTTTCAGTTGGTGGGATGATATAGGTACATTTAGGACTGGTGAAACTGCAACCATTAAGGTTAAAGTACTTGAGAATGGTGATAAAATTGATAGGAATATTTTCCATCCCATACTTACTGTCAATGGAAAGGAGGGAAATAGTTCCTATGTATCCACCGTGTTGTCGGATTTCCAAGGAGACTTTGATAATTGGAAGATTTCCTTCACTCCCATTAGGGTTGGATTGTTCAATGTCCTCATTGATGAAGATCGTTACAAAGTTTCTGACTCGTCGTTGCATTTCCAAGTTGAACCAGGGAACATGTATCCATCTGTGTGTATAGCATCATGGAAGGGGATGAAATACGAGTTCGAAGCTGGTTCAAAAGCAACAATTATGGTGCTACTTAAAGATGCATTTGGGAATGGAATATCTAAGACAACACAAGTTTCCTATATGCCTGATTTTAAGTTGCATGTGTTAAGTAACAATGGTTCTATTGCAAATGAACCTGAAATCTCCAACATGGCATGGAATGAGTTTGATTATATAGTCATTGAGTTTGTAGTCACCAAATCTGGAAACTTCTCTTTGCGGATCGAAGGAGGAAATCAAACTTTGAACGGTTCTCCCTTACCGTTAAAAGTGAATCCAGGAGTTATAGATGTCTCTAAATGTGTTGCTAAATGGAAAATCGAACATCATGCATGGCAATTGTCTTCCAAGATGGAGATCTTTATACATCAGTTGGATCAATACGGAAATCTGGTTTGGGGACTGTATCCATTTGACGTTGAAGTCGTTGAAAGAGACACAAATTTGTCGATACCGATAGCAGATCTTCATTTCGAGGAAGGGGAAGCGGGAATTCAGTTGTTTTCGTTTGGTAATTGGGAACCAGGGAACTTCCTGCTAACAATATATGATGCCAAACATAACAAAAGCATTTCCAATATGCCATATGTATATACTGTTTTTGTCGGTTATTGTGATGGCGTAAAAAGTGTTATCAATGGATCTGGTTTAAATGATTCAGTTGCAGGGATAAAAGCAGAATTCTCGGTTTATTTGAATGACATGTATCAATATCCTTCTCCTGTTGAAGAAGGCATACTTCAAGTACAAATCTTAAAAAATAACGATTCGTATAGTGTTTCACCAACTATATATCCCATTATAAACAATAATGGGAGTGGAATGGACTCAAAAATGAGATACAACGGTATGGAAACCGCCGTATCACCTTCACTTTCAATTGATATAGGCAACAATGTGAGGAACACAAACATAATTAGCAGCGTATTTCAAGTGGAATACACACCAGAGAAAAGTGGGTTTTATAACCTTAGTGTATATTGTGGAAACATAATATTGAATGAGGGCCATTCATTCAGAAAAGAGGTAAAACCAGGTGAAGTAAATATCTCCTTGTCAAGTGTGGTGAGGTTTTCTTCAAAGGTACCAAAACTATCAAAGAATGAAATAGTTGTACAGGTTTTGGATTCATATTTGAACCCGGTCCTCTCGCAAGAATCAAGGTTGAAATTAGAGATTACTTCAACTAATCGTTTGGGATTTTCAACTTGGGACACCATTTATAATGCGGATGGATCATACACTTGCAGTTATATGGTTAAAGATGTTGGCACTTATGAGATTTGTGCTTCTTTTGATGGCATGCATTTCTTGCCATGTCCCCTCAGTATCAATGTGTATAGTAATGAATATTTTCCTAAGGCCAATGATGATACATTATCTATTTGGGAGGGAGAATCCATTGCCTTTAATGCCTTGGAAAATGATTATTTTGCTGGTGATAATGCAAGTATAGTTGAATTCTCAAAATCAGATCATGGGTCACTTATACAGAACGGAAGGATCTTTCGCTACACACCCTATCAAGATTACTATGGAAATGATTCTTTTTGGTATACAATATCTGATATAAATGGAAATCTTGCTACGGCTTCTGTGTACATTTCTGTTCTCAATATTCCACCGCAGTTTGCTTCGGTTCCAAGTCAACTGCAAGCAACAGAAGATCTGATAAGTCCGAGATTCGGCGGTTTTTCTGGTTTTGAGATAACATATTCAAATCTATTGGAAAATATAACTGTCAATCTGAGAGCACAATCTGGAAGTATATTTCTGTCTCCGGTGCTGATGCAATTTGGAGAACCAATGTGGAGTGAACTTACAATTAATGCAGGAAACGAAACAGAAAACAGTTTAACACTAGAAGGCTCGGTGGAAGTTATTAATATCGCGCTTCAGTCGATTCAGTACCTCGGAAATGAGAATTTTTATGGTTCAGATACCATTCAAGTCTCCGCGAAGAATAAGAATGGGGTAAATTCATTGAGTGTTCCGATTTTTGTAGATCCTATCAATGATCCTCCATATATAAGAGTCCCTTACTTCATCATATTGATGAGTGACGAAAATGAGAGACTTATCTTTGACAAAAATAAAGACAAGTTTGAGTTTTACATTGGAGATCCCGATCTTCTCACGTTCCCCGTTGGCGAGGCTCATTTTCTGATGATGTTTTCTATGGAAGTAAGCGATGGATTATTAGCGACAAATCTTCCATTTCATTTGATCAACACAACTGAAGTGAAGCACAGGAGTAATTATCAGTGGCAGTCTCTTCAAACATATGTAACTATCTCAAAGCACTTTATGGTCAAAGCTGGTGGAATCAGATTTCAAGGCACAGTAAATGACTGCAATACTGTTATGCAGCAACTCTATTATCATGGAGATGAACGTGGAGCAACATTAACATTGACATTGAATGACATGGGAAGCTATGGATGTTATCCAGATTGTGAAGAAGGAATGACAGTGCCATTATACACTGAGGCTATGGTTAACTTGATGAGAAAGCAACCAATGGATTCATTTCTTGCTCACACATTAGGATCAATTATTGTGATTGAATTCGTTATTATTTCGTCTCTTGGATTGTTGCTTCTATACTTCACCTGCAAATGTGCAATTCTTCTTGTGCATGAAAGGAGAAACAATAAGAAAAGGTCTTCAGAGCCATCTGCTGATCAAAGTTCCCAAGGACAAACTTCAAGCATCAACATACCCGAGAATGCTACTAATTTCACCGGCTGCTGTTGGAGCTCTTCCTTGCTCCGTTTTCGTATGCAATCCTCAGATTTTCGCCAACGGTTACGTCCTCCATTTGAAGCTGGAGAACCTAGCAAGACAGTGAATTCATCCTCTCCTTCAACAAGTGAAACACTGCATGCAGTTATTTCCAACCTCGACCACTCTTGA 3375 0.3819 MSLLLMRTVFWKKTRGSGGRSDRGDGDRSQLPMIAFSWWDDIGTFRTGETATIKVKVLENGDKIDRNIFHPILTVNGKEGNSSYVSTVLSDFQGDFDNWKISFTPIRVGLFNVLIDEDRYKVSDSSLHFQVEPGNMYPSVCIASWKGMKYEFEAGSKATIMVLLKDAFGNGISKTTQVSYMPDFKLHVLSNNGSIANEPEISNMAWNEFDYIVIEFVVTKSGNFSLRIEGGNQTLNGSPLPLKVNPGVIDVSKCVAKWKIEHHAWQLSSKMEIFIHQLDQYGNLVWGLYPFDVEVVERDTNLSIPIADLHFEEGEAGIQLFSFGNWEPGNFLLTIYDAKHNKSISNMPYVYTVFVGYCDGVKSVINGSGLNDSVAGIKAEFSVYLNDMYQYPSPVEEGILQVQILKNNDSYSVSPTIYPIINNNGSGMDSKMRYNGMETAVSPSLSIDIGNNVRNTNIISSVFQVEYTPEKSGFYNLSVYCGNIILNEGHSFRKEVKPGEVNISLSSVVRFSSKVPKLSKNEIVVQVLDSYLNPVLSQESRLKLEITSTNRLGFSTWDTIYNADGSYTCSYMVKDVGTYEICASFDGMHFLPCPLSINVYSNEYFPKANDDTLSIWEGESIAFNALENDYFAGDNASIVEFSKSDHGSLIQNGRIFRYTPYQDYYGNDSFWYTISDINGNLATASVYISVLNIPPQFASVPSQLQATEDLISPRFGGFSGFEITYSNLLENITVNLRAQSGSIFLSPVLMQFGEPMWSELTINAGNETENSLTLEGSVEVINIALQSIQYLGNENFYGSDTIQVSAKNKNGVNSLSVPIFVDPINDPPYIRVPYFIILMSDENERLIFDKNKDKFEFYIGDPDLLTFPVGEAHFLMMFSMEVSDGLLATNLPFHLINTTEVKHRSNYQWQSLQTYVTISKHFMVKAGGIRFQGTVNDCNTVMQQLYYHGDERGATLTLTLNDMGSYGCYPDCEEGMTVPLYTEAMVNLMRKQPMDSFLAHTLGSIIVIEFVIISSLGLLLLYFTCKCAILLVHERRNNKKRSSEPSADQSSQGQTSSINIPENATNFTGCCWSSSLLRFRMQSSDFRQRLRPPFEAGEPSKTVNSSSPSTSETLHAVISNLDHS 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02729 1124 SUPERFAMILY E set domains 357 484 IPR014756 -
Vivi4g02729 1124 PANTHER JITTERBUG, ISOFORM N 734 1060 IPR044801 GO:0030036|GO:0051015
Vivi4g02729 1124 MobiDBLite consensus disorder prediction 1044 1061 - -
Vivi4g02729 1124 ProSiteProfiles Filamin/ABP280 repeat profile. 355 496 IPR017868 -
Vivi4g02729 1124 MobiDBLite consensus disorder prediction 1038 1061 - -
Vivi4g02729 1124 Gene3D - 607 687 - -
Vivi4g02729 1124 ProSiteProfiles Filamin/ABP280 repeat profile. 562 599 IPR017868 -
Vivi4g02729 1124 MobiDBLite consensus disorder prediction 1091 1124 - -
Vivi4g02729 1124 SUPERFAMILY E set domains 137 256 IPR014756 -
Vivi4g02729 1124 Gene3D Immunoglobulins 135 245 IPR013783 -
Vivi4g02729 1124 MobiDBLite consensus disorder prediction 1099 1124 - -
Vivi4g02729 1124 Pfam Filamin/ABP280 repeat 357 483 IPR017868 -
Vivi4g02729 1124 Pfam Filamin/ABP280 repeat 520 595 IPR017868 -
Vivi4g02729 1124 Gene3D Immunoglobulins 344 505 IPR013783 -
Vivi4g02729 1124 SUPERFAMILY E set domains 521 601 IPR014756 -
Vivi4g02729 1124 Gene3D Immunoglobulins 518 606 IPR013783 -
Vivi4g02729 1124 Pfam Bacterial Ig domain 596 679 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02729 - - mtr:11416683 1868.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02729 4 130117766 130122963 Vivi4g02729 4 130117766 130122963 ECH