Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02718 ATGGAACCTTACACTTATTCATCGTTGGAAATGCTTACAAAGTTTATGAACATTGATGTTTCATCTAACCATATTGTTATGGTACTTTTGGTAATAGGTTTAGCAACCTTTTACTTTGCATGTAGAAGAAAAGTACACATTTATTTGATAGATTTTAATTGCTATTGTCCTCCAAGTTCTTATAGACTACCTAAAGCAATGTTTGAAGAGAATAATGCTTATGATGAAATGGAACAAGAAGCCGTTGACTTCATAAGTAAAATCAGTGCGAAATCTGGATTCAGCGATGAAACGTCGATTCCTCCGTCTCTTGCTCAAATACCTAAAGTTAAAGCTCTCACATTTGCACTCGAAGAAGCTGAAACAATAATGTTTACAGCAGTCAAAGATCTTTTAGCAAAAAACAAAATCAACCCGAAATCCATCGATATTTTGATAACTAACAGTAGCATTTTCTGTCCTACGCCGTCTCTTAGTTCAATGGTGGTTAACAAGTTCATGATGAGAAGCGACATCATGAGCTTCAATTTATCAGGTATGGGATGCAGTGCTGGAATTATAGCAGTTAGTCTTGCTAAAGACTTGTTGAGAGTTCATAGGAACTCAATGGCTTTAATAGTAAGCACAGAGACACTTAGTTTAAATTGGTACACAGGGAAAGTTCCATCTATGCTACTAACTAATTGCTTATTCAGAATGGGAGGATCAGCTATATTGATGTCTAGTAGGCTTCAAGATAAGCATAAGGCGAAATATGAGCTACAACATATTGTAAGAACAATCAATGCATATGATGATCAATCTTATGCATGTGTCTACCAGAATGTGGATTCGGAGAACAAGGAAGGTGTATCGATATCAAAGAATATAGTTAATGTTTGTGGTGATGTGTTGAAGAAGAACATTGGTACATTAGGACCATTGGTTTTGCCATGGAGGGAGCAGTTCCTGTATGTGATTTCGATTCTTTGTTACAAACTATGTAGTAGAAGAACAAGCATATATACTCCAAAATTTAACAGGGCTTTTGAGCATTTCTGCATACATTCAGGAGGAAGAGCTGTTATACAAGCCATTGAAAGAAACTTGAAGCTAAAAGAACTGGATGTGGAGCCATCAAAAATGACTTTATATAGATTTGGAAACACTTCATCTGCTTCAATTTGGTATGAGTTGTCCTACATAGAAGCAAAAGGGAGGATGAAATGTGGAGATAGGGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTATGGAAATGTCTAAGTGATGTTAAGCCTGATATCACCACTGCTTGGAGGGACACAATACACTCATACCCAGTAGATATTTTGTGA 1350 0.3659 MEPYTYSSLEMLTKFMNIDVSSNHIVMVLLVIGLATFYFACRRKVHIYLIDFNCYCPPSSYRLPKAMFEENNAYDEMEQEAVDFISKISAKSGFSDETSIPPSLAQIPKVKALTFALEEAETIMFTAVKDLLAKNKINPKSIDILITNSSIFCPTPSLSSMVVNKFMMRSDIMSFNLSGMGCSAGIIAVSLAKDLLRVHRNSMALIVSTETLSLNWYTGKVPSMLLTNCLFRMGGSAILMSSRLQDKHKAKYELQHIVRTINAYDDQSYACVYQNVDSENKEGVSISKNIVNVCGDVLKKNIGTLGPLVLPWREQFLYVISILCYKLCSRRTSIYTPKFNRAFEHFCIHSGGRAVIQAIERNLKLKELDVEPSKMTLYRFGNTSSASIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCLSDVKPDITTAWRDTIHSYPVDIL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02718 449 PANTHER 3-KETOACYL-COA SYNTHASE 24 447 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vivi4g02718 449 PIRSF Very_long_ch_3-ktacl-CoA_syn 3 449 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vivi4g02718 449 Pfam FAE1/Type III polyketide synthase-like protein 40 326 IPR013601 GO:0006633|GO:0016020|GO:0016747
Vivi4g02718 449 SUPERFAMILY Thiolase-like 254 426 IPR016039 GO:0016746
Vivi4g02718 449 CDD CHS_like 28 423 - -
Vivi4g02718 449 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 343 424 IPR013747 -
Vivi4g02718 449 Gene3D - 60 424 IPR016039 GO:0016746
Vivi4g02718 449 SUPERFAMILY Thiolase-like 36 243 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02718 Vivi-Chr4 129295835 129297184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02718 30 446 Acyl Lipid Metabolism Gene Families AT1G71160 54.067 1.54e-166 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02718 K15397 - gmx:100783404 702.59