Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02624 ATGGTGCATAATTCAGAGGAAAACCCTTACAATCACTCAATTTCCATTGAAAGTTTAAACCGCTATAAGCATTTTCTCTATGGACTCAACAATCAAGTTAATCAGCTTGAGAAGCAAGTAAAGGAGGTTGAACAGTTTTACCAATCGATTGATGATCTAAACAATGATTTCAAAAACAAAGGCTGGGAGAAGCCTCCTACTGGATCTAAGAAGCCATTGCAACGTGCTTTAGAAGAAATGCAAGAGGAGATCATCCGCCATTTCTCCAAAATGTTGAGTGAGATAACTCAGCACAGATGGGCATGGCCCTTTTTGGAACCCGTAGATGTTGAAGGTCTCGGGCTGGATGATTATTTTGAGATCATAAAGAAGCCTATGGATTTTAGCACTATAAAAATAAAAATGGAGGCTAAAGACGGCTCTGGTTATAAGAACGTGAGGGAGATATATGCTGATGTAAGGCTGATTTTTAATAATGCAATGAAATACAATGATGAAAACAGTGATACCCATAAGATGTCCAAGACTTTGCTGGACATATTTGAGAAGAAATGGTTGCTTCTTTTGCCTAAAGTTGTTAAGGCGGAGAGTGAACTATCAAAAGAAGAAGCACGTGAGAATTTGACTAAAAAGCTTGCTCAAGAAAATGCTTATGCCAACATGACTAGGAAGTTAAACGCTGAGCTTTCTAAGGCAGATATGACTTTGACGAATCTCAAAACTACAATGATTGCAAAGTGCAGGAAACTGTCACCTCTGGAGAAACCGTTACTTGCGGCTGAAATCACCAAATTGTCTCCTGATAACCTCCGCACCGCGTTAGAGATACTTAATGAGAATAATCCAAATTTCCAATATAGTGTTGACAATTTGACTACTGAAGATGTGACCCTTGACCTTGACTCTCAGAGCAACTACAATGTGTGGAGATTGTATATGTTTGTCAAAAATGCGCTAGAACTTCAAGATGCAGCAAGCGCGGTTACTCAAGATAACAACATTGAGGAAAAGGAATCAGATGCCAAAAGAAGGAGAATGGTGTGA 1044 0.3908 MVHNSEENPYNHSISIESLNRYKHFLYGLNNQVNQLEKQVKEVEQFYQSIDDLNNDFKNKGWEKPPTGSKKPLQRALEEMQEEIIRHFSKMLSEITQHRWAWPFLEPVDVEGLGLDDYFEIIKKPMDFSTIKIKMEAKDGSGYKNVREIYADVRLIFNNAMKYNDENSDTHKMSKTLLDIFEKKWLLLLPKVVKAESELSKEEARENLTKKLAQENAYANMTRKLNAELSKADMTLTNLKTTMIAKCRKLSPLEKPLLAAEITKLSPDNLRTALEILNENNPNFQYSVDNLTTEDVTLDLDSQSNYNVWRLYMFVKNALELQDAASAVTQDNNIEEKESDAKRRRMV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02624 347 SMART bromo_6 77 190 IPR001487 GO:0005515
Vivi4g02624 347 ProSiteProfiles Bromodomain profile. 96 171 IPR001487 GO:0005515
Vivi4g02624 347 Gene3D - 245 323 IPR038336 -
Vivi4g02624 347 Pfam Bromodomain extra-terminal - transcription regulation 251 317 IPR027353 -
Vivi4g02624 347 ProSiteProfiles NET domain profile. 240 326 IPR027353 -
Vivi4g02624 347 Pfam Bromodomain 89 174 IPR001487 GO:0005515
Vivi4g02624 347 Coils Coil 26 56 - -
Vivi4g02624 347 PRINTS Bromodomain signature 152 171 IPR001487 GO:0005515
Vivi4g02624 347 PRINTS Bromodomain signature 99 112 IPR001487 GO:0005515
Vivi4g02624 347 PRINTS Bromodomain signature 115 131 IPR001487 GO:0005515
Vivi4g02624 347 PANTHER OSJNBA0053K19.4 PROTEIN 16 325 - -
Vivi4g02624 347 SUPERFAMILY Bromodomain 67 191 IPR036427 GO:0005515
Vivi4g02624 347 Gene3D - 54 211 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02624 Vivi-Chr4 126831594 126836393 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02624 - - cam:101515481 427.943