Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02506 ATGTCATCAGATTCTGATATCGATGCTGATGTGAAGCCTACCATTTTCCGAGAGTACATTGGCATGGAAGATAATATAGATGATTTTCCTGCAAACATGATCAACGACAACATCAAAGAATTCCACTTCATTCTGGGCTTTGCAACCGAGTTGTATGTTTATGGAAAAGGCACAGGAGAATTTAACCGCACTTGGAGCATTGAGAACTTTAGCCCAGAAAATGTGGCTAAACTCAAGCAACTGCATAGGCAAGTGAAAGTGGTAATAAGCATAGGAGGCAATGGCCATGAATATCAATTCAACCCTCAGAATAATGAAGACTGGATTACGAATGCTGTATCATCAATCAAAGAGATCATCCTAGACTACGAGAACGAAGTCATGGACGATGATAACATAATTGACGGTATTGATATTAACTATGAAAACATCACTTCCAGTGTCGACGACTTTTCAAACTGCATAGGGCAGGTCATACAAAAACTCAAGGAAGATCCGGATGTTTCCAAATCCATGAAAATAGTGTCCATTGCTCCAACAGAGTTACTCCAACCCCACTACCTCAAACTGTATCTAGTCAACAAAGACAATATTGACTGGATTGACTACAAGTTCTACAATCAGTATTTTTCCTCAAGGGATGAGTTTGTAAGTCTTTTTAAGAAACTAGTTACTGATTATGATACGGAGTTTAAACTCTTGGCAGGAGTCAGCACCTATACAGGTATTCCATCTGAATCACAAGGTTTAATTGTTGACGGATGTAAATACCTCCTTAGCCGTGCATCACTAGCTGGAGTTTTTGTTTTGGATGCTAATGCCTCTGCCCCCGCATATTCACTTGAGAGACAGCTTCAAGAACTCCTTACTAAAGAGTGA 879 0.397 MSSDSDIDADVKPTIFREYIGMEDNIDDFPANMINDNIKEFHFILGFATELYVYGKGTGEFNRTWSIENFSPENVAKLKQLHRQVKVVISIGGNGHEYQFNPQNNEDWITNAVSSIKEIILDYENEVMDDDNIIDGIDINYENITSSVDDFSNCIGQVIQKLKEDPDVSKSMKIVSIAPTELLQPHYLKLYLVNKDNIDWIDYKFYNQYFSSRDEFVSLFKKLVTDYDTEFKLLAGVSTYTGIPSESQGLIVDGCKYLLSRASLAGVFVLDANASAPAYSLERQLQELLTKE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02506 292 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 109 158 IPR000727 -
Vivi4g02506 292 Gene3D Glycosidases 13 292 - -
Vivi4g02506 292 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 14 292 IPR001223 GO:0005975
Vivi4g02506 292 PRINTS 2-S globulin family signature 58 73 IPR000677 -
Vivi4g02506 292 PRINTS 2-S globulin family signature 13 26 IPR000677 -
Vivi4g02506 292 PRINTS 2-S globulin family signature 253 272 IPR000677 -
Vivi4g02506 292 PRINTS 2-S globulin family signature 98 112 IPR000677 -
Vivi4g02506 292 PRINTS 2-S globulin family signature 75 93 IPR000677 -
Vivi4g02506 292 Pfam Glycosyl hydrolases family 18 64 211 IPR001223 GO:0005975
Vivi4g02506 292 SUPERFAMILY (Trans)glycosidases 15 283 IPR017853 -
Vivi4g02506 292 PANTHER CHITINASE 2-LIKE 12 291 - -
Vivi4g02506 292 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 134 142 IPR001579 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02506 Vivi-Chr4 121925433 121926687 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02506 - - vvo:131597766 333.954