Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02444 ATGTTGGGTGGTTCACTTTCAACACCAACAACTCAAACTCTTAAAGCAACAAGAACAACAACAGTTACAATGCTTTGTTCATCTCATAGATTATTATCAACACATTTTTGTCTTTTTAAGAATCTTATAGCAGGTAATAGAAGATTTTCCTCAAATGAGAGTTGTTTTCTCAGAGGTAACCAAATTAATATCAAGCAAGTTTTTGGGCTTATCTCTCGTCGACCTCCAAGAAACAAAGCAGCATTTGTTGTTTCTCCAAGATGTGTTCTACCACTGACAGAAGAGAATGTGGAAAGGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCCTTACATGAGATAGATGGTCTTGTTGTTATCCTCAAACTACAAGGAGCATGTGGATCATGTCCTAGCTCAACCATGACATTAAAGATGGGGATCGAAACTCGTCTTCGCGACAAGATTCCAGAAATCTTAGAAGTCGAGCAAATACTAGATACTGAGACCGGTCTTGAGTTAACCGAAGAAAGTGTCGAAAGTATTCTTTCGGAAATTAGACCGTATCTTATTGGCACTGGAGGAGGAACATTAGAGCTTGTTGAGATAAGTGATTATACTGTTAAAGTTCGGTTAAGTGGACCGGCTGCAGGAGTCATGACAGTTCGCGTTGCCTTGACGCAGAAGCTGAGAGATAAGATACCTTCTATTGCTGCTGTGCAGCTGATAGAATGA 732 0.4071 MLGGSLSTPTTQTLKATRTTTVTMLCSSHRLLSTHFCLFKNLIAGNRRFSSNESCFLRGNQINIKQVFGLISRRPPRNKAAFVVSPRCVLPLTEENVERVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELTEESVESILSEIRPYLIGTGGGTLELVEISDYTVKVRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLIE 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02444 243 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 94 168 IPR034904 -
Vivi4g02444 243 Pfam NifU-like domain 97 162 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vivi4g02444 243 Pfam NifU-like domain 178 240 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vivi4g02444 243 FunFam NifU-like protein 3, chloroplastic 89 171 - -
Vivi4g02444 243 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 92 241 - -
Vivi4g02444 243 Gene3D - 89 171 IPR034904 -
Vivi4g02444 243 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 172 242 IPR034904 -
Vivi4g02444 243 Gene3D - 172 243 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02444 Vivi-Chr4 120014244 120015741 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02444 - - gmx:100806364 351.673