Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02317 ATGATCAATGGTAAAGATGTATACAACATTGTTGAGAGTGTTTTCCCCTTATATGTAGCAATGACGCTAGGTTATGCATCAATAAAATGGTGGAAAATTTTCACACCAGATCAATGTGCTGGCGTAAACCATTTCGTAGCATCATTTGCAGTTCCAGCATTAACTTTCGTCTACATAATTCCAATAAATCCTTACCATATGAACTGGAGGATACTAATAGCCGACACACTTCAAAAAATAGTGACACTCTTGTGCCTAATCCTATGGAACATTTTCACGAAACGAGGTAGTTTCGATTGGACTATAACGGTTTTCTCACTCATTAACTTACCTAACACGCTTGTGGTTGGGATTCCTCTCTTGCAAGCTATGTATGGAGATTCGACGCCGCTTTTGATCCAGATAGTGTTCATGCAAGGAGTTTTGTGGTATACTGTTTTGTTGATAATGTATGAGTATAGGGCGGCGAGGATATTTATTGCGCAGCAGTTTGTGGTGAGGAATGAGGATGGGACGGAGTCGGTTATGACGGAGTCGGAGAAGATTGATATTGGATCGAATGTTGATGTGGAGTTGGGGGAGCTTTTGCATAGTTTGAGTGTTAGGTCGGGTTCGAGGAAGAATGGGGTGTTTAGGAGGAGTAAGAGTACTAGTAGTGCTAATTTGGGTATTGAATGGAAGAGTGTGAAGAGTAGGAGTGGGAGGGTTTCTCCTCATCCGATTTTGAAATCTATTAGTGGGAAAAGAAATATGAGTTCTAGTGGTCGTTTGACACATGAAATTGAACCATCAGAAGTTGATAACTTTGCATTGTTTGGAATTAAAGTAAGTACAGAGAGAGAGCACGAGAGCAAGGAGGAGAAGATGGAGGATATTAAAGAAGAAATTAATGAGGAACAAATGCCACCAAGTCAATCCATGGTGTTAAAGCTCATTGTAATTAGGGTTTACAAGAAACTCATCAAAAACCCTAATCTTTGGGCTTCAGTTCTTGGCATCATATGGGCTCTCATAGCAGCTAGGTTGAACATCAAATTGCCAACAATCATATATGATTCTGTTACAATAATGTCTAAAACTGGACTAGGGATGTCCATGTTTAGTCTAGGCATATTCATGGCATTACAACCCAAGATCATTGCGTGTGGAAAAAAAGCAGCAGCAATGTCTATGCTACTTAAGTTCTTGATTGGTCCTGCGTTGTTTGGTGCAACCTCTGCAGCAGTTGGTGTCCGTGGAGTTGTTTTTAAAATAGGAATCGTGCAGGTAAAGTTGTGA 1278 0.403 MINGKDVYNIVESVFPLYVAMTLGYASIKWWKIFTPDQCAGVNHFVASFAVPALTFVYIIPINPYHMNWRILIADTLQKIVTLLCLILWNIFTKRGSFDWTITVFSLINLPNTLVVGIPLLQAMYGDSTPLLIQIVFMQGVLWYTVLLIMYEYRAARIFIAQQFVVRNEDGTESVMTESEKIDIGSNVDVELGELLHSLSVRSGSRKNGVFRRSKSTSSANLGIEWKSVKSRSGRVSPHPILKSISGKRNMSSSGRLTHEIEPSEVDNFALFGIKVSTEREHESKEEKMEDIKEEINEEQMPPSQSMVLKLIVIRVYKKLIKNPNLWASVLGIIWALIAARLNIKLPTIIYDSVTIMSKTGLGMSMFSLGIFMALQPKIIACGKKAAAMSMLLKFLIGPALFGATSAAVGVRGVVFKIGIVQVKL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02317 425 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 423 - -
Vivi4g02317 425 NCBIfam auxin efflux carrier 1 423 IPR014024 -
Vivi4g02317 425 Coils Coil 275 299 - -
Vivi4g02317 425 Pfam Membrane transport protein 10 423 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02317 Vivi-Chr4 114850541 114853165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02317 279 425 Organic Solute Cotransporters AT1G73590 42.405 3.73e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02317 K13947 - ming:122076926 227.254