Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02314 ATGGCTGCATATGCAAGAATCAATGTTACAATGATGATGGTGATGATAGCTTTAGCAATCTCTCTTTATTGGGATTCAGCTTCAGCTTCATCCGTCGGTGAGTTTGTTGACAAGACCATAAACTCCCACAAGATCGTCATCTTTTCCAAGACTTATTGTCCGTACTGTAGAAAAGCGAAAGCCGTTTTCAAAGAATTGAACCAAGTTCCGTTTGTTGTGGAGCTTGATGAGAGAGATGATGGTTCAAAGATTCAAGATGTTTTGACTAATATTGTTGGGAAGCGTACCGTGCCACAAGTTTTTATCAACGGGAAACACCTCGGCGGATCAGATGATACTGTCGAAGCATATGAGAGCGGGCTTTTGGCTAAACTTCTAGGAATTGAGACTGACGATCATGATGATCTTTGA 411 0.4136 MAAYARINVTMMMVMIALAISLYWDSASASSVGEFVDKTINSHKIVIFSKTYCPYCRKAKAVFKELNQVPFVVELDERDDGSKIQDVLTNIVGKRTVPQVFINGKHLGGSDDTVEAYESGLLAKLLGIETDDHDDL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02314 136 Pfam Glutaredoxin 45 106 IPR002109 -
Vivi4g02314 136 Gene3D Glutaredoxin 23 127 - -
Vivi4g02314 136 ProSiteProfiles Glutaredoxin domain profile. 33 133 - -
Vivi4g02314 136 PRINTS Glutaredoxin signature 104 117 IPR014025 -
Vivi4g02314 136 PRINTS Glutaredoxin signature 45 63 IPR014025 -
Vivi4g02314 136 PRINTS Glutaredoxin signature 90 103 IPR014025 -
Vivi4g02314 136 ProSitePatterns Glutaredoxin active site. 47 62 IPR011767 -
Vivi4g02314 136 FunFam Glutaredoxin 2 27 131 - -
Vivi4g02314 136 SUPERFAMILY Thioredoxin-like 34 126 IPR036249 -
Vivi4g02314 136 NCBIfam glutaredoxin 45 125 IPR011899 -
Vivi4g02314 136 CDD GRX_GRXh_1_2_like 44 125 - -
Vivi4g02314 136 PANTHER GLUTAREDOXIN 2 20 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02314 Vivi-Chr4 114794615 114797238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02314 34 126 Miscellaneous Gene Families AT4G15700 33.333 8.68e-12 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02314 K03676 - gmx:100777703 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02314 4 114794615 114797238 Vivi4g02314 4 114794615 114797238 ECH