Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02199 ATGGCTAACAACAAAGAGGCTTTCAACATCTCAGATCTCAGTTCCGCTCTCAATGAAGAGGATCGGGCTGACCTAGTCAACGCTCTCAAGAGTAAGATACAAAGTCTTGCTGGACAGCACTCTGATGTTTTGGAGAGTCTGTCTCCTGTTGTTAGGAAGCGTGTTGAGGTTCTCAGAGAGATTCAGAGTGAACATGATGAATTGGAGGCCAAGTTTTTGGAAGAGAGAGCTGCCCTTGAAGCCAAATACCAAGTTTTGTATCAACCATTGTACACTAAGCGCTATGATATTGTGAATGGTGCCACTGAAGTGGATGGGGTAGCAGTTGAAACTACTGATGGAGAAGAAGACAAAGAGAAAGGAGTGCCTTCATTTTGGCTCAATGCTATGAAAAACAATGATGTCTTGGGTGAAGAGATTACAGAGCGCGATGAAGGTGCTCTCAAGTTTCTCAAAGATATCAAGTGGACAAGGATTGAAGAACCTAAAGGATTCAAACTTGAGTTTTTTTTCGATTCCAATCCCTACTTCTCAAACTCGGTGTTGACCAAAATCTACCATATGGTTGATGAGGACGAGCCTATTCTGGAGAAGGCTATTGGGACTGAAATTCAGTGGCTTCCAGGAAAATGCCTGACCCAAAAGATTTTGAAGAAAAAGCCCAAGAAGGGTGCAAAGAATGCTAAACCAATTACCAAGACTGAAACCTGTGAAAGTTTCTTTAACTTTTTCAATCCACCAGAAGTTCCTGAAGATGATGAAGACATTGATGAAGATATGGCTGAGGAGCTTCAGAATCAGATGGAACAAGACTATGACATTGGGTCAACAATAAGAGATAAGATTATCCCCCATGCTGTATCATGGTTTACTGGGGAGGCTGCTCAGGGAGAGGAGTTTGGAGACCTGGATGATGAAGATGAGGATGAGGACGATGATGGTGAGGAGGATGATGAAGATGAGGATGAGGACGAAGATGATGATGATGATGAAGAGGAGGAAGAGACTAAGACTAAAAAGAAGTCATCTGCTAGTAAGAAGAGCGGAATTGCTCAACTCGGCGATGGTCAGCAGGGTGAAAGACCACCAGAGTGCAAGCAGCAGTAG 1107 0.4345 MANNKEAFNISDLSSALNEEDRADLVNALKSKIQSLAGQHSDVLESLSPVVRKRVEVLREIQSEHDELEAKFLEERAALEAKYQVLYQPLYTKRYDIVNGATEVDGVAVETTDGEEDKEKGVPSFWLNAMKNNDVLGEEITERDEGALKFLKDIKWTRIEEPKGFKLEFFFDSNPYFSNSVLTKIYHMVDEDEPILEKAIGTEIQWLPGKCLTQKILKKKPKKGAKNAKPITKTETCESFFNFFNPPEVPEDDEDIDEDMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQGEEFGDLDDEDEDEDDDGEEDDEDEDEDEDDDDDEEEEETKTKKKSSASKKSGIAQLGDGQQGERPPECKQQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02199 368 Gene3D Nucleosome assembly protein 117 293 - -
Vivi4g02199 368 MobiDBLite consensus disorder prediction 293 368 - -
Vivi4g02199 368 MobiDBLite consensus disorder prediction 298 333 - -
Vivi4g02199 368 FunFam Nucleosome assembly protein11 117 293 - -
Vivi4g02199 368 FunFam Nucleosome assembly protein 1-like 1 45 103 - -
Vivi4g02199 368 SUPERFAMILY NAP-like 30 292 IPR037231 -
Vivi4g02199 368 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 33 318 IPR002164 GO:0005634|GO:0006334
Vivi4g02199 368 Coils Coil 58 78 - -
Vivi4g02199 368 Gene3D - 45 104 - -
Vivi4g02199 368 Pfam Nucleosome assembly protein (NAP) 53 293 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02199 Vivi-Chr4 108903578 108907425 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02199 K11279 - gmx:100785314 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02199 4 108903578 108907425 Vivi4g02199 4 108903578 108907425 ECH
Vivi4g02199 4 108903578 108907425 Vivi4g02199 4 108903578 108907425 PCT