Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02134 ATGGGTGCAGACCATGGTGAAAACGGAGGAAGCGATGATTCTGAGAAGGTGGAAGTGAACATATATCCTTTGAATTCTTACTATTTTGGATCCAAACATGCCATTCCTTTCAAAGATCAAGACCGTCTTCAAAGATTCAAATCCAATTATGCTGACCGTGGAATGCGAATTAATGTTGAAGCTGCTCTAATGGTTGAGTTGTTCAAACATCCGCATTTGTTGCTGTTGCAAATAAAAAATTCCATCTATAAACTTCCCGGTGGCCGTTTGAGGCCAGGTGAATCAGATACTGATGGATTGAAGCGTAAGCTGGCAAAGAAGCTTTCTGCTGATGAAGATGAGGCACAATGGGAGGTAGGAGAGTGCCTTGGAATGTGGTGGAGGCCTGATTTTGAAACATTGATGCAACCTTTCTTACCACCTAATGTCCAACATCCAAAGGAGTGTACAAAACTCTTCCTTGTAAAGCTTCCGGAAACTCGAAGGTTCACAGTGCCAAAGAACATGAAGTTGCTTTCGGTTCCATTGTGCCAAATTCATGAAAATCACAAGATATATGGGCCAATTATATCTTCAGTCCCACAGCTACTCTCAAAATTCTCTTTCAACATGATCGGAATTTAA 624 0.4135 MGADHGENGGSDDSEKVEVNIYPLNSYYFGSKHAIPFKDQDRLQRFKSNYADRGMRINVEAALMVELFKHPHLLLLQIKNSIYKLPGGRLRPGESDTDGLKRKLAKKLSADEDEAQWEVGECLGMWWRPDFETLMQPFLPPNVQHPKECTKLFLVKLPETRRFTVPKNMKLLSVPLCQIHENHKIYGPIISSVPQLLSKFSFNMIGI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02134 207 SUPERFAMILY Nudix 55 136 IPR015797 -
Vivi4g02134 207 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 17 204 - -
Vivi4g02134 207 Pfam Nucleotide hydrolase 18 200 IPR016706 GO:0003729|GO:0005849|GO:0006378
Vivi4g02134 207 FunFam Pre-mRNA cleavage factor Im subunit 2 17 204 - -
Vivi4g02134 207 PIRSF CPSF-25 4 206 IPR016706 GO:0003729|GO:0005849|GO:0006378
Vivi4g02134 207 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 14 205 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02134 Vivi-Chr4 105605018 105607245 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02134 K14397 - gmx:100791216 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02134 4 105605018 105607245 Vivi4g02134 4 105605018 105607245 ECH