Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02090 ATGGAGGATGATACATTTTCTGGTATTGGAAATGGCACACAAATTGATACAAAGATTTTGGGTACTTTTCAGAAGAGTTTTGTCCAAGTGCAGAACATTTTGGATCAGAACAGGTTATTAATCAACGAGATAAACCAGAATCACGAGTCCAAGATTCCGGATAATTTAAGCAGGAATGTTGGACTTATTAAAGAGCTCAACAACAATATTAGAAGAGTCGTCGATTTATACGCCGAACTTTCGAGTTCGTTTACGAAATCTATTGATGTTACTTCAGAAGGAGATTCAAGTGGTGCTGTGAAATCAGATGGAAAAGGTGGACACAAAAGAATCAGGCCTACATAG 345 0.3739 MEDDTFSGIGNGTQIDTKILGTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRNVGLIKELNNNIRRVVDLYAELSSSFTKSIDVTSEGDSSGAVKSDGKGGHKRIRPT 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02090 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Vivi4g02090 114 PANTHER PROTEIN ELF4-LIKE 4 12 112 IPR040462 GO:0042753
Vivi4g02090 114 MobiDBLite consensus disorder prediction 88 114 - -
Vivi4g02090 114 Coils Coil 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02090 Vivi-Chr4 102126559 102128841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02090 - - ccaj:109808760 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02090 4 102126559 102128841 Vivi4g02090 4 102126559 102128841 ECH
Vivi1g00769 1 16577327 16579337 Vivi4g02090 4 102126559 102128841 PCT