Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02048 ATGGTAGCCATAGCAACCCCCCAGAGAATCAAAACCTTCGAAGACTTCGCTAAAGTTCATGCAATTTTACTCGCCGCCTCAGGCTTGCCGGAGCCACTTCACCGCCGCCTCTTCCAGAAACTCTCCACTGAGACATTTGACGGCGGCGAACACTTCCAGATCGAGCCATGCGAAGAAAACCGCCAGAGACGCCTCGTCTTAACTTCGGATTCTATGGCCAAAGACTCCAATGTCTTCCTCATCGATCATGCTTGGACTTTCAGACTCCCCGACGCTTACAAACAGCTGCGTGAAGTTCCGGGATTAGCAGAGAGGATGAGTTCTTTGATGTGTGTGGATATTGACAGAAATTTAGATGGTGAAACTGAGGTGGATGAAGTTGGTGATGAAGTTTCGAGAGACAAGGTTGATGTTGTGGAAGTAGTTGAGAGGGAGGTTCGAGAGGCGAAAGAGAAAGGTGATGGTACATTGAGATGGTTAGAGCTTGACGGTCTCGATATTGATGATGATACGCTTCTCTCACTGGACTTGCCTGCTAGATTTCCGGATTTAGTTACGCTTAGCCTATATGGAAACAAGCTTACAAGAGCTGACCTGATTGTTAAGGAAGTCATCAAATTTAAACATCTCAAAGGACTCTGGCTGAATAATAATCCGGTTCTTAAAAATCGTGATGGTGAGCTTGCAGATATTATTCTTAAAGAATTACCAGAACTGGAGATTTATAATTCAACTTTCACAAGCAATTTTGGGGAGTGGGCTTTGGGCTTTTGTGCAGAGATATATGGAAAGGATAGCCCAACAAATGCTGATCAAGCTGACAGTCCACTGCTGAGTGTATCTAATCTCGATCTTTCGGATAGAAACATTCACAATTTGATCAACAAGGAATTTTCACCCATTAGTTTGCCATCCCTTTCTTACTTGAATATTCGTGGAAATCCATTGGAGCAAAACTCAATTGCCAACTTGTTAGGTCTGCTGAGGGAATTCCCTTGCTTACGCTCCTTGGAGGTTGATATTCCTGGTCCTCTTGGAGGAAGTGCCATTGAAATTCTAGAATCTCTTCCAAACATTTCTGAACTAAATGGTATTAGTACATCCAAAATATTGGAAACTGGAAAGCATGTTATTGATTCAGTGCTTCATCCTCGCCTCCCTGAATGGACCCCTGACGAGCCTATTCATGATCGTATTATAAGTGCAATGTGGCAATATCTAATGACATATAGGCTTGCTGATGAAGAAAAGTTAGACGAAACCTCTGTATGGTATGTGATGGATGAATTTGGTTCTGCTTTGCGGCACAGTGATGAGCCAAATTTTAGAGTGGCACCCTTTCTTTTTATGCCGGAGGGTAATCTAGCATCAGCCGTGAGCTATTCCATTCTGTGGCCGACACGAAATGTTTGGAAAGGTGATGAATGCAGTCGTGACTTTCTTCTTGGTATTGGGGAAGATAAACAACGCTCTGCCAGACTTACTGCCTGGTTCCATACGCCAGAGAACTATTTTATCCAAGAGTATGAGAAGCACAATCAGACATTGCGATCCACAAGTTTATTACCAACCACCGTGCAGTCTTCTGAGAGTAAAAGTATCCGTCCGCATGATGGACGTCTATTACGGGTTTACACAGATATACCTCAGGTGGAGGAGTACTTGACGCATCCTGATTTTTCAATCATAAAGGACCCAAAAGATGCAGATATAATATGGACATGTGTGCAAGTAGATGAGGAATTGAAGAAGGCCACAGGAATAACAGATCAGCAGTACGTTAATCAATTTCCGTTTGAGGCTTGTCTTGTCATGAAACATCATTTAGCAGAAACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACTCATCTGAGTCAACTTATTGGTGACTATAATGTACGCAAAAGAGAAGGACTAGACAACCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACAATTGATACTACTGTAACTGATAATTTATCGTCCATAATCCGACTCATGGAAACTGGTCCAAAAATATGCCAGAAGTATATTGAACAGCCTGCTTTGTTCCAAGGGAAAAAGTTTGATCTTCGTTACGTAGTACTGGTTCGGAGCATGCACCCTTTGGAGATATTCCTATCAGATTGTTTCTGGGTAAGGATAGCCAACAACCAATATTCGTTGGACAAAAGTAGTCTTTTTGAGTACGAAACTCATTTCACTGTTATGAATTATAGAGGAAGAATAAATCAAAAGAATATTAAGGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAGTGGTTGAATATACATACCAGAGTAAGGAGCATGATTCGTTCAGTGTTTGAGGCAGCTGCGGTTGCACATCCTGAGATGCATAGTCCAACATCAAGGGCAATTTACGGTGTAGATGTCATGTTAGACAGCTCTTTCCAACCTAAGTTATTAGAGGTAACTTACTGCCCTGATTGTACGCGTGCTTGCAAATATGACATGGATATCGTAGTTGGAGAAGGAGGTGTTGCCAAAGGTTCTGATTTCTTCAACAATGTGTTCAAGTGTCTCTTTTTGAATGAAATTTCTCAGGTTAGTCCATTGTAA 2622 0.4195 MVAIATPQRIKTFEDFAKVHAILLAASGLPEPLHRRLFQKLSTETFDGGEHFQIEPCEENRQRRLVLTSDSMAKDSNVFLIDHAWTFRLPDAYKQLREVPGLAERMSSLMCVDIDRNLDGETEVDEVGDEVSRDKVDVVEVVEREVREAKEKGDGTLRWLELDGLDIDDDTLLSLDLPARFPDLVTLSLYGNKLTRADLIVKEVIKFKHLKGLWLNNNPVLKNRDGELADIILKELPELEIYNSTFTSNFGEWALGFCAEIYGKDSPTNADQADSPLLSVSNLDLSDRNIHNLINKEFSPISLPSLSYLNIRGNPLEQNSIANLLGLLREFPCLRSLEVDIPGPLGGSAIEILESLPNISELNGISTSKILETGKHVIDSVLHPRLPEWTPDEPIHDRIISAMWQYLMTYRLADEEKLDETSVWYVMDEFGSALRHSDEPNFRVAPFLFMPEGNLASAVSYSILWPTRNVWKGDECSRDFLLGIGEDKQRSARLTAWFHTPENYFIQEYEKHNQTLRSTSLLPTTVQSSESKSIRPHDGRLLRVYTDIPQVEEYLTHPDFSIIKDPKDADIIWTCVQVDEELKKATGITDQQYVNQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYNVRKREGLDNLWILKPWNMARTIDTTVTDNLSSIIRLMETGPKICQKYIEQPALFQGKKFDLRYVVLVRSMHPLEIFLSDCFWVRIANNQYSLDKSSLFEYETHFTVMNYRGRINQKNIKDFVREFEEEHQVKWLNIHTRVRSMIRSVFEAAAVAHPEMHSPTSRAIYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGSDFFNNVFKCLFLNEISQVSPL 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02048 873 Gene3D Ribonuclease Inhibitor 258 370 IPR032675 -
Vivi4g02048 873 ProSiteProfiles TTL domain profile. 537 865 IPR004344 GO:0036211
Vivi4g02048 873 Gene3D - 664 846 - -
Vivi4g02048 873 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 650 830 - -
Vivi4g02048 873 Pfam Tubulin-tyrosine ligase family 591 841 IPR004344 GO:0036211
Vivi4g02048 873 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 6 872 IPR027749 -
Vivi4g02048 873 Gene3D Ribonuclease Inhibitor 130 249 IPR032675 -
Vivi4g02048 873 SUPERFAMILY RNI-like 157 366 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02048 K16609 - gmx:100809212 1439.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02048 4 98928691 98935642 Vivi4g02048 4 98928691 98935642 ECH