Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01999 ATGGAAACTTCTAGTCTCCTCGTGCCACCTCTAAAAATATACCATCAACAAGCCTGTATAGACGGTGGTTCAAATTTATCAAATAAAATTAGTTGGTCTCAGAAGATAACATGCTGCAATGACGTGTTCTACGTGAATGTGCCATTTACCTTTCCAGATTTCGTCAACCCCGCCGGGAAGAGAATGGCTAAAAAAGAAAAGATACAATTAAACGTGAATGCTGTTAATGGTAGTGAGATTACGTGCAAGACAACAAGTCATCCCACGAAGGAAGTAAAGCGCAATGCTGGGGGCATAGGTTTCTCACATGACACTGATGTTCTCTCTTGGTCAAAATTTGATTTTAATTTCTCATATACTGTCTCTTCTAATCAAACAAATGGAGGGATTATTTTGGAATCTGCATATGTGGATGATGATGATCAAAGAGATATGTTTTGCATGTACCTTTCTCCTGGAAATCTTCAGGGTAAGAAGGTCTTCAGGAAAGACATTGTATTCGTTATTGACATAAGTGGAAGCATGCGAGGAAAGCTAATTGAAGATACAAAGAATGCATTATCAGCTGCTCTCTCTAAGCTTGATCCCGATGATTCGTTTAGTATTATAGCATTTAATGGAGAGATATATCAGTTTTCAACTACAATGGAATTGGCTTCAAACGATACTGTTGAAAGGGCCGTTGAATGGATCAACATAAACTTTCTTGCTGGGGGTGATACAAATCTTTTGCATCCATTAAACATGGCAATAGAGATGCTATCTGATGCTCGAAGACCAGTTCCAATTATTTTTTTATTTACAGATGGAACTGTTGAAGATGAGAGACAGACTTGTGACGTGATAAAGAATGGGATCAAAGGAGAATCAATATTCCCCCGAATTTACACTTTGGGCATAGGTTCATTCTGCAATCACTATTTCTTGCGGATGCTAGCTATGATTAGCAGGGGCCAACATATTGCAGCCTTGGATGTAGATTTGGTTGAGCCTCAAATGCTAAAACTGTTTAACAAAGCTTCATCTCTTGTTCTTGCAAATATCACAATGGACATACTTGATGACCTGGATGAAGTTGAGGTTTTTGCAAGAGAACAAATAGACTATCTTACTTCTCAAGCATGGCTTACTAACAATAAACAATTAGAACAGAAGGTTGCAAAACTAAGCTTACAAACTGGCTTTTTGTCGGAGTATACACGTATGGGAATTCTCGAGATTGATCAGCTAAAGAAATCCAAGCAATCAGATGGAGCCAAAGTATCAAAAAACAAAGGTGAAAATGTCCAAGGTGAGAGAATGCTTTTGCTTCCAAAGTTAGGTATAGGCTTTGGCAACTTGACTGCAACTGCTGAGAACACTCCACCAGGAGCTGAAGATACGAAATTGCCCGATGGGGCTGAAATCTTTGTTAAGGCAGCCACAGCTTGTTGCGGCAGCCTCTGCAACCATTGCTGTTGTTCAGATATATGTTGTGCTGGAAATGAAAGTTGA 1494 0.3922 METSSLLVPPLKIYHQQACIDGGSNLSNKISWSQKITCCNDVFYVNVPFTFPDFVNPAGKRMAKKEKIQLNVNAVNGSEITCKTTSHPTKEVKRNAGGIGFSHDTDVLSWSKFDFNFSYTVSSNQTNGGIILESAYVDDDDQRDMFCMYLSPGNLQGKKVFRKDIVFVIDISGSMRGKLIEDTKNALSAALSKLDPDDSFSIIAFNGEIYQFSTTMELASNDTVERAVEWININFLAGGDTNLLHPLNMAIEMLSDARRPVPIIFLFTDGTVEDERQTCDVIKNGIKGESIFPRIYTLGIGSFCNHYFLRMLAMISRGQHIAALDVDLVEPQMLKLFNKASSLVLANITMDILDDLDEVEVFAREQIDYLTSQAWLTNNKQLEQKVAKLSLQTGFLSEYTRMGILEIDQLKKSKQSDGAKVSKNKGENVQGERMLLLPKLGIGFGNLTATAENTPPGAEDTKLPDGAEIFVKAATACCGSLCNHCCCSDICCAGNES 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01999 497 CDD vWA_interalpha_trypsin_inhibitor 161 335 - -
Vivi4g01999 497 SMART VWA_4 162 341 IPR002035 -
Vivi4g01999 497 ProSiteProfiles VWFA domain profile. 164 356 IPR002035 -
Vivi4g01999 497 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 20 363 - -
Vivi4g01999 497 Pfam von Willebrand factor type A domain 164 321 IPR002035 -
Vivi4g01999 497 Gene3D von Willebrand factor, type A domain 163 340 IPR036465 -
Vivi4g01999 497 SUPERFAMILY vWA-like 163 331 IPR036465 -
Vivi4g01999 497 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01999 Vivi-Chr4 95687271 95693383 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01999 - - vvo:131594994 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01999 4 95687271 95693383 Vivi4g01999 4 95687271 95693383 ECH
Vivi1g00809 1 17399941 17405259 Vivi4g01999 4 95687271 95693383 PCT