Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01921 ATGACAAAAGTTGCAAAACTAACAAAACTCAAGTCAGTGCTGAAGAAATGGAACACCTTCGCCTATTACAACAACAAGCACAACCGCTCTGACATCAGAGCGGTTGTGAACGAGGACGAGTCGTGTGCGTTATCAGAACAAGACCTTCGTCCCGTGTTTGTTGGAAAGACGAGGCGTAGGTACCTTGTTAACTCCGATGTTGTTGGACATCCGCTGTTTCAGGAGCTTGTGGACAGGTCTCGCAGCTCGATCGAGGTAAACAATGACGATGATGATACCGTTAATGTGGCTTGTGAAGTTGTCTTGTTTGAACATATGTTGTGGATGATCGAGAATACTGATCCTCAACCGGAATCTTTGGATGAACTCGTTGATTATTACAGTTGCTAG 390 0.4487 MTKVAKLTKLKSVLKKWNTFAYYNNKHNRSDIRAVVNEDESCALSEQDLRPVFVGKTRRRYLVNSDVVGHPLFQELVDRSRSSIEVNNDDDDTVNVACEVVLFEHMLWMIENTDPQPESLDELVDYYSC 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01921 129 PANTHER EXPRESSED PROTEIN 28 128 - -
Vivi4g01921 129 Pfam Auxin responsive protein 10 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01921 Vivi-Chr4 89448592 89449273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01921 1 112 Calmodulin-binding Proteins AT3G43120 23.188 9.62e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01921 - - mtr:25486572 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01921 4 89448592 89449273 Vivi4g01921 4 89448592 89449273 ECH