Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01735 ATGGCAGACAGCAACAAGAAGGAAATCCAAATCCGAACCCTAACTGGCGATTCTATCACTCTTCACATCACTCCCACTGCCACTGTCCAACACCTCAAGCTTCTACTCAACCACTCTTTCTCTCCCGCCACCAATTCCCCCAATTTCCATCTCTTTTTCAAGGGCAATAAATTGCAATTGCTTGATGAAATTGGTTCTTATCTCATCCAAGACGGCGAGTTTCTCGTTTTGATTCCATTCGTCAAGAAGGAGCCGACTTCAACAGAGAAACCAAATCCAGCTAATGTTGTTTTCAATGCTTCAACTTCGAATCTTGCGGATACAACGTGGTCCAATATAATGGAAGATTTGTCAGAATTACGCCAAACTACCCAAGAAATTGACCATAATAATGTATCTAATTTTGAGACGAATAAAAATAACACTGTGGAGGGTGAAAAGGGGATAGAGCTTCCTTATCATCTCATATTGAATACATTGGATAGTACTAGTCATACTGCTCTTGGAGAGCGTAGTTGTGAGGTTTTTTCGAAGGTTTTGGAGTCGGTGAATTGTTTATCTGATTTGCCTCTTGGACAGTGCAAGTTGTTCAAGAGGGCATGCGTGAAGGGATATTGTGGCAATGATGGTGGCGGGGTCACTTGCTTGTGTCCACAGTGGTTGAAGATAGTTGTGAAGTCGTTTGCTTTCATGAATATCTTTTCTGCCTTTCTTCATTTGCAGGGTAGGAAGGTAACCACAGGTCTAATGAAAGAAGCACTTGACCAGCTTGCTAAGTTTGGACTCAAACTTGGCCTGGATGACATGAAGTCTCTCTCCCTTCTTTGTCCTCATCTAGTTTGTTTTGTAGATGACATAGAGAAGGCAAGGTTTGGCTATGTCATTGTTGTAGTAAATCATTCAAGTAACAATGAAGATCAAATTGAAGATAATCTTAAAAGAGCTCGCAGGTCGCTTTATGTTTCAAAGATTGTCAGTACATTAAAGAGAAGGGAATGCTCTTTCCGAAAATGTCTAGGGTGGGCTTTTGAACAGCTTCAGTTTGAAATTGGAGATGAGATGAACGTGAAAATTTCCTTTGAAGAACTGTTTGCAGCAGTCAAGGACCGTGATTTTACAAGGAAAGAAAACAAAACAAAACGTGTAAAGAGATGCTCAACTTCCTCAAGACTTGACATGGACCGCATTGGGTGTCATGACACAAGGTCATTAATGGCTGTGGACATGGTTGAACATCTTAAGAAAGGAATTGGATCTGAAGGACAGATTGTACATATTGAAGATATATGTGCCAGAAAAGCCATTTACAGTGAGATCCCCGCTGAATTATCAGAAAAAATGAGATCTGCACTAGATTATATTGGAGTTTCCAAATTGTATAGTCATCAGGCAGAATCTATTCAAGCCTCCCTTGTCGGGAAGAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCTGTTTGCTACAACCTGCCTGTTCTAGAAGAGTTGCTTAAAAATTCCTCCTCATGTGCATTGTACGTATTTCCAACGAAGGCGTTAGCTCAAGATCAACTAAGGTCTTTGTTACACATGACAAAAGAATTTGATGCCGACTTAAATATTGGTATATATGATGGTGACACTTCTCATAGCGAAAGGACACGGCTACGTGATAATTCTAGACTGTTAATCACAAATCCAGATATGCTACATATATCAATCTTGCCTCACCATCGGCTATTTGGCCGGATTTTATCAAATCTAAGGTTTCTGGTAATTGATGAAACTCATACCTACAAGGGGGCATTTGGATGTCATACAGCTCTTATATTAAGGAGGCTTAAGCGACTCTGCTCACATGTATATGGAGCTGTTCCTTCTTTTATATTCTCTACTGCCACTTCTGCGAATCCTCATGAGCATTCTATGGAACTTGCAAATTTATCCAAAGTGGAGTTATTTCAGAAAGATGGAAGTCCATCTGCAAGAAAACTTTTCATCCTTTGGAATCCTGCTTTGCGACCAAAAGCTATATTCAATAAAACTCGGTTTTCTATGGATAATGATGAGTTGGCCGATGAAAGTACAAATTTTGTTCGTTCAAGCCCAATCGTGGATGTTTCACGCCTTCTTGCTGAAATGGTTCAGCATGGTCTTCGCTGCATTGCATTTTGTAAATCACGGAAGCTTTGTGAACTTGTTTTATCCTATGTACGTGAGATTCTTCATGAGACAGCCCCGCATCTACTGGATTCCGTATGTGCGTATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGAGTGCTTTATTTGGTGGTAAAATTTGTGGTGTTGCTGCAACCAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGACGTCACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGGGGTGGGAGAAGAGATAGACCATCTCTTGCTATATATGTTGCATTTGGTGGACCACTTGATCAATACTTCATGAAAAATCCTAGAAAACTTTTTGAAAGACCAATCGAATGCTGTCATATTGATACTCAAAACAAGCAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTCACGAACACCCTCTGAGTGTGCAGTATGATGAGCAGTATTTTGGTGCTTGCTTAGAGAGTGTTTTGAGTTCTCTAAAAGATAGAGGATACTTATGTCCTGATCTGTCTGATTCTTCAAGAGTTTGGAACTACATTGGCCCCGAGAAATTGCCTTCGCAAGCAGTCAATATCCGAGCAATAGAAACTGTTAGATATAGTGTCATAGATCAGAAAAAGAATGAAGTCCTAGAAGAGATAGAGGAAAGCAAGGCTTTCTTTCAGGTATATGAAGGTGCAGTGTACTTGCGCCAGGGGAAAACTTATTTGGTTGAAAAATTAGATCTATCTAGCAAAGCTGCTTTCTGTAAAGAGGCTGATCTAAAGTATTATACAAAGACTCGAGATTACACTGATATCCATGTCATTGGGGGTAATATTGCTTATCCAGTAATTGATTCCATCATGTTTCCAAAAACAAATGTGCGCGCCAATGTATGCCAAGTGACGACTACTTGGTTTGGATTTTATCGTATTCGGAAAGGAAGCAATCAAATCATTGATTCTGTTGATCTAGCCCTTCCTCAGTACTCATACGAGTCACAGGCAGTCTGGGTTCCTGTGCCACAATCAATAAAAGAAGCGGTGGTCAAGCAAAATTATGATTTCCGTGGAGGTTTGCATGCCGCTTCTCATGCTGTTTTACACGTAGTGCCTTTACATATAATGTGCAACTTGTCTGATTTGGCTCCCGAGTGTCCGAATCCTCATGACAGCCGATATTATCCTGAAAGAATCTTAATATATGATCAACATCCTGGAGGGTCTGGAATTTCAGTACAGGCTCAACCTCACTTCACAAAGTTCCTGGCAGCTGCTCTAGAAGTGCTCACATGTTGCCGCTGTACGGCTGATGTAGGTTGCCCTAATTGTATTCAGAGCTTTGCTTGTCATGAGTATAACGAGGTTTTGCACAAGGATGCTGCCATTATGATCATCAAGGGTATTCTAGATGCAGAGAACTAG 3603 0.4083 MADSNKKEIQIRTLTGDSITLHITPTATVQHLKLLLNHSFSPATNSPNFHLFFKGNKLQLLDEIGSYLIQDGEFLVLIPFVKKEPTSTEKPNPANVVFNASTSNLADTTWSNIMEDLSELRQTTQEIDHNNVSNFETNKNNTVEGEKGIELPYHLILNTLDSTSHTALGERSCEVFSKVLESVNCLSDLPLGQCKLFKRACVKGYCGNDGGGVTCLCPQWLKIVVKSFAFMNIFSAFLHLQGRKVTTGLMKEALDQLAKFGLKLGLDDMKSLSLLCPHLVCFVDDIEKARFGYVIVVVNHSSNNEDQIEDNLKRARRSLYVSKIVSTLKRRECSFRKCLGWAFEQLQFEIGDEMNVKISFEELFAAVKDRDFTRKENKTKRVKRCSTSSRLDMDRIGCHDTRSLMAVDMVEHLKKGIGSEGQIVHIEDICARKAIYSEIPAELSEKMRSALDYIGVSKLYSHQAESIQASLVGKNVVVATMTSSGKSVCYNLPVLEELLKNSSSCALYVFPTKALAQDQLRSLLHMTKEFDADLNIGIYDGDTSHSERTRLRDNSRLLITNPDMLHISILPHHRLFGRILSNLRFLVIDETHTYKGAFGCHTALILRRLKRLCSHVYGAVPSFIFSTATSANPHEHSMELANLSKVELFQKDGSPSARKLFILWNPALRPKAIFNKTRFSMDNDELADESTNFVRSSPIVDVSRLLAEMVQHGLRCIAFCKSRKLCELVLSYVREILHETAPHLLDSVCAYRGGYIAEERRKIESALFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAIYVAFGGPLDQYFMKNPRKLFERPIECCHIDTQNKQVLEQHLVCAAHEHPLSVQYDEQYFGACLESVLSSLKDRGYLCPDLSDSSRVWNYIGPEKLPSQAVNIRAIETVRYSVIDQKKNEVLEEIEESKAFFQVYEGAVYLRQGKTYLVEKLDLSSKAAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVIDSIMFPKTNVRANVCQVTTTWFGFYRIRKGSNQIIDSVDLALPQYSYESQAVWVPVPQSIKEAVVKQNYDFRGGLHAASHAVLHVVPLHIMCNLSDLAPECPNPHDSRYYPERILIYDQHPGGSGISVQAQPHFTKFLAAALEVLTCCRCTADVGCPNCIQSFACHEYNEVLHKDAAIMIIKGILDAEN 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01735 1200 Pfam DEAD/DEAH box helicase 461 630 IPR011545 GO:0003676|GO:0005524
Vivi4g01735 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 823 IPR027417 -
Vivi4g01735 1200 CDD DEXHc_Hrq1-like 459 640 - -
Vivi4g01735 1200 Pfam MrfA Zn-binding domain 1089 1171 IPR018973 -
Vivi4g01735 1200 Gene3D - 8 97 - -
Vivi4g01735 1200 SUPERFAMILY Ubiquitin-like 9 91 IPR029071 -
Vivi4g01735 1200 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 467 648 IPR014001 -
Vivi4g01735 1200 PANTHER ATP-DEPENDENT HELICASE HRQ1 28 1199 - -
Vivi4g01735 1200 Gene3D - 696 824 IPR027417 -
Vivi4g01735 1200 CDD SF2_C_Hrq 661 825 - -
Vivi4g01735 1200 SMART helicmild6 735 816 IPR001650 -
Vivi4g01735 1200 FunFam DEAD/DEAH box helicase 694 843 - -
Vivi4g01735 1200 Pfam Ubiquitin family 9 77 IPR000626 GO:0005515
Vivi4g01735 1200 CDD Ubl_ubiquitin_like 9 78 - -
Vivi4g01735 1200 Gene3D - 432 651 IPR027417 -
Vivi4g01735 1200 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 701 859 IPR001650 -
Vivi4g01735 1200 SMART ultradead3 455 661 IPR014001 -
Vivi4g01735 1200 ProSiteProfiles Ubiquitin domain profile. 7 78 IPR000626 GO:0005515
Vivi4g01735 1200 Pfam Helicase conserved C-terminal domain 705 814 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01735 Vivi-Chr4 76836376 76849686 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01735 - - cam:101511069 2036.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01735 4 76836376 76849686 Vivi4g01735 4 76836376 76849686 ECH