Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01606 ATGGCCACTTCCAATCTCTCCCAGCAATTTCATTCTTCTACTGCTTGCGCCATTTTCCGACGACCAAGTTTCGCCGTGAACATCCACCAGTATCCTTGTCTTAGAGGCAAAACCAAGAAGCACACAAAGTGGGCAGTTAAAGTAGAGCAGAGTCCACCAAAATCAAATATAAATTTGGAGCAACTGGCGGCTTTTCTGTACGACGATCTTCCTCACCTCTTTGATGATAAGGGTATCGATAAAAGTGCTTATGACGAACGTGTGTTGTTTCGAGACCCAATCACTAAGCATGATAATTTGAGTGGTTACCTTTTCAATATTGCCCTTCTTAAGACACTCTTTACACCTCAATTTCAGCTGCATTGGGTTAAACCGACAGGAGCTTATGAGATAACAACAAGATGGACAATGGTTATGAAATTCACGCTACTTCCATGGAAACCCGAATTGGTCTTTACAGGAACATCTCTCATGGGTGTTAACCCACAAAATGGCAAGTTTTGTAGCCATCTGGACTTTTGGGATTCACTAAATAAAAACGATTATTTTTCACTTGAAGGTTTGTGGGATGTTTTCAGACAGGTTAGACAGTATGATCCGTTCGTAGTAGTAGAAACCAACGGAGACAAGCTATCTGGGAATACTGGCTTTAATGATGTTGCTGGATATATATTTGGAAAGAATTCAACAGCAGAAAAGATACCAATGACTACTCCTGTCTTCACTCAAGCCATTGATCCTGATTTGTCCAAAGTTTCAATCCAAATAGTTCTTCCATCAGACAAAGAAACAAAGAGTTTACCAAATCCTAATCAAGAAACAGTTAGTGTGAGAAAGGTAGAAGGAGGCATTGCTGCAGTGATAAAGTTTAGTGGAAAACCCACAGAAGATGTTGTTCTCGAAAAGGAGAAAATCTTGCGTTCAAATATCATTAAAGACGGTCTAAAACCTAAGGCTGGTTGTTTGCTTGCCCGGTACAATGATCCAGGTCGAACATGGAACTTTATAATGAGGAATGAAGTGCTCATTTGGCTAGACGACTTCTCATTGGATTAG 1056 0.4034 MATSNLSQQFHSSTACAIFRRPSFAVNIHQYPCLRGKTKKHTKWAVKVEQSPPKSNINLEQLAAFLYDDLPHLFDDKGIDKSAYDERVLFRDPITKHDNLSGYLFNIALLKTLFTPQFQLHWVKPTGAYEITTRWTMVMKFTLLPWKPELVFTGTSLMGVNPQNGKFCSHLDFWDSLNKNDYFSLEGLWDVFRQVRQYDPFVVVETNGDKLSGNTGFNDVAGYIFGKNSTAEKIPMTTPVFTQAIDPDLSKVSIQIVLPSDKETKSLPNPNQETVSVRKVEGGIAAVIKFSGKPTEDVVLEKEKILRSNIIKDGLKPKAGCLLARYNDPGRTWNFIMRNEVLIWLDDFSLD 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01606 351 SUPERFAMILY Probable bacterial effector-binding domain 190 345 IPR011256 -
Vivi4g01606 351 PANTHER HEME-BINDING PROTEIN-RELATED 72 345 IPR006917 -
Vivi4g01606 351 Gene3D Regulatory factor, effector binding domain 189 348 IPR011256 -
Vivi4g01606 351 FunFam SOUL heme-binding protein 190 348 - -
Vivi4g01606 351 Pfam Uncharacterized conserved protein (DUF2358) 61 170 IPR018790 -
Vivi4g01606 351 Pfam SOUL heme-binding protein 194 343 IPR006917 -
Vivi4g01606 351 SUPERFAMILY NTF2-like 72 175 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01606 Vivi-Chr4 65193888 65196714 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01606 - - gmx:100789568 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01606 4 65193888 65196714 Vivi4g01606 4 65193888 65196714 ECH