Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01531 ATGGATGATCACAGAAACACGACCCCTAACGCTATTGGACTTTGTCTCCTCCCACAAGAACTGATCCAGAACATCTTCCTTTCACTCGTTTTACCCGAGATCGTTCGCTTGAAACTCCTCAACAAATCCTTCTCAACCTTAATCTCTGATCACAGTTTCGTTCGTCAGTGCAACTCACTTTCAAACTCCACCACATGGCTCTTTGTCTACAAGAAACGCTGGCTCCGCGATGCTGTGCTTCACGCTTTCACCGATCGGAGCTCCGATCGTTGGTTCCGGATCCCCATAGCAGAACTTCTCAAACCTGTAGACTTTCACGGTGAGGATCTTTACTTTCTTGCTGCTTCCGCTAACGTTTTTCTCTTTGCTTCCAACAACGTTCGCGAGGTTGTCGCCGTTAATTTAGTCTCCGTCACCGTTAAGAAGATCCCTCCTTCTCCGTTGGGTCCACGTGGCACTTCCTCGTGGAGGAGATCCGGGATGAAGCTTGTAACCGATTCTTCCGGGTCGGGTCATTTTCGGTTCATGTTTGCGGAGTTTGTCGGGAACCGACCTGTTTTGTTTGTGTACGACTCGGTGAGTGACACCTGGAAGTCAACGGAGGTTCAAGAAAAAGGGAACGATGAGGTTTTGCCACGTGGCGGGGTGCACGTGTTTCTTAGTGTGGTTCATGGACCCAGAGAGAGCGTTTTGGTTGCTTCAACCCCCGATTGTGACACGCCTGTCGTTCTACGGCCACGATTCAATGACGCGGAAGGATTAACCGTTGGATTTAACTGGGGGAACGTAATTGATAGGTTACATGTCTACGGCGATGGATACATGATGATAGTGAAATCAGAAGGGGAAAATGGGAATAGAAAAGTGAGGGTGTTGAAAGGTGTGGAATTGTGGGGAGTGAGTTTGGATGGAAGGAAATGGGAGTTCGTTTCAGCGGTACCTGGGGAAGTGATGGGAGTGATTGAGAAGCCTTATGGAGTAATGATGGGTTGTTTAGAGGAGAAAAATGGAATTATAAGGGTAGCTTTAGTGTCTAATTGTGATGGTTTTTGGGACATATTGTGGCTTTCTTTTGATACCAAATGGAAACGTTGGAACTGGATGCCGCTACCTGATTGCAAAATGAAAGGCTGGAACATGGCTGGAATAAGCTTCTCCTCCGGACTTACTTTGCAATGA 1179 0.475 MDDHRNTTPNAIGLCLLPQELIQNIFLSLVLPEIVRLKLLNKSFSTLISDHSFVRQCNSLSNSTTWLFVYKKRWLRDAVLHAFTDRSSDRWFRIPIAELLKPVDFHGEDLYFLAASANVFLFASNNVREVVAVNLVSVTVKKIPPSPLGPRGTSSWRRSGMKLVTDSSGSGHFRFMFAEFVGNRPVLFVYDSVSDTWKSTEVQEKGNDEVLPRGGVHVFLSVVHGPRESVLVASTPDCDTPVVLRPRFNDAEGLTVGFNWGNVIDRLHVYGDGYMMIVKSEGENGNRKVRVLKGVELWGVSLDGRKWEFVSAVPGEVMGVIEKPYGVMMGCLEEKNGIIRVALVSNCDGFWDILWLSFDTKWKRWNWMPLPDCKMKGWNMAGISFSSGLTLQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01531 392 ProSiteProfiles F-box domain profile. 11 57 IPR001810 GO:0005515
Vivi4g01531 392 SMART fbox_2 17 57 IPR001810 GO:0005515
Vivi4g01531 392 PANTHER BNACNNG10540D PROTEIN 16 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01531 Vivi-Chr4 59912838 59914489 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01531 - - gmx:100805433 660.988