Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01526 ATGCAGGGGAGTTCGAATGCTTCGGAATCAGCAATGGTGATAGAAACCCTAAGAAATAAGGGTTGGTATTTGCAAGACACCGACGATCTTAAGGCAATCATCATTATTCAAACTGCACTAGCCGATCAACCTTCCGACGTCTTACACTCCATCGAATCGGAGCTCCTCAATTCCGACCTCAGATCCATCGGCGCCAAATCCTTACCCGAACCATCTCTTCTTCGTAACCCATCGTTCTATCTCCAGGGACCCAAAGTTCTTCAGATATCTTCGGTGAGGGACATATCCATGAGCAGTGTCGATAACATTTCAAGAAATTCAAGTGCTCGACGAGTTCTGAGATTGTGTCTCACTGATGGTCACTCTGAGATAACTGCCATAGAATACTCTCATATTCCATTTTTACCTGACAATGTTGTTCCTGGCACTAAGATTCGTTTGGAAAACAAAGTTCCGGTTCATAGTGGTATAGCTTGCTTAAATCCGAAAGCATTGACTGTTTTAGGGGGCGTTGTTCAATCATTGTTTGAAGAATGGCAGATGAACCAAAAATATTCAGGCTTCTCTCGGTCATCTTTAAGACAGCTAGAGGATCGTGATACAGGTGGTCCTCCTTCATTTGTGAAGCTGCAGGTTGGATCTATCTCAGGTTATGCAGATAAGAACTTTCGAAGTAATAAGCCCATTGCTGGTGCTGGTAGAGGTGAGCTGAGGCCTACTGGTATCCAGCAAGATCGGAATCTGAAAGAAGATATCATGGACGCAAATCTAAAATCCAAATTGCCTTCTGAGCGAGCTGAAGACAAACCTAGTAGTTCAGGGTTAAGGCCAAAAGAAAGAGCTGAAGACAAACCTAGTAGTTCGAGTACAAGGCCAAAAGAAGTTGTGGAATCTGTTCCCGTGCAAAATCAAGCAGCTGCCCAAAAATTACTTCAGAAACTAAATCAACCAAATCAGCGTGATCGGCATCCTAGGGGTCGGAGACATAGGGGGAAGAGTCAAGAAGAAGATGAAGTTGTATTTACGCTTGAAGAATATGAAAAAAGAAAGACCCAAGTAAAGCCTTCTTATAATGACGAGGCTCTAGATATTAGCCCTGACGAGTATCTTGCTAGGCAGCTTCAGAATCAATTTAACCTTGAACATTCTCAGGTACAAAGGGGTCCTCGTGAATCTGAAGCAGATAATATTCGAATGAATATGTTCACATATGAAAAGGATTCTGACGACAGCTATCAAATGGGAAGAGGAGGAAGAGGTAGAGGAAGGGGAAGGGGTAGGGGTAGAGGTAGAGGAAGAGGGAGGGGAAGACATGGTTAA 1320 0.4356 MQGSSNASESAMVIETLRNKGWYLQDTDDLKAIIIIQTALADQPSDVLHSIESELLNSDLRSIGAKSLPEPSLLRNPSFYLQGPKVLQISSVRDISMSSVDNISRNSSARRVLRLCLTDGHSEITAIEYSHIPFLPDNVVPGTKIRLENKVPVHSGIACLNPKALTVLGGVVQSLFEEWQMNQKYSGFSRSSLRQLEDRDTGGPPSFVKLQVGSISGYADKNFRSNKPIAGAGRGELRPTGIQQDRNLKEDIMDANLKSKLPSERAEDKPSSSGLRPKERAEDKPSSSSTRPKEVVESVPVQNQAAAQKLLQKLNQPNQRDRHPRGRRHRGKSQEEDEVVFTLEEYEKRKTQVKPSYNDEALDISPDEYLARQLQNQFNLEHSQVQRGPRESEADNIRMNMFTYEKDSDDSYQMGRGGRGRGRGRGRGRGRGRGRGRHG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01526 439 MobiDBLite consensus disorder prediction 312 339 - -
Vivi4g01526 439 Pfam RecQ mediated genome instability protein 43 180 IPR013894 -
Vivi4g01526 439 SMART DUF1767_2 14 104 IPR033472 -
Vivi4g01526 439 MobiDBLite consensus disorder prediction 403 439 - -
Vivi4g01526 439 Gene3D - 59 188 IPR042470 -
Vivi4g01526 439 MobiDBLite consensus disorder prediction 221 300 - -
Vivi4g01526 439 PANTHER SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED 15 429 - -
Vivi4g01526 439 MobiDBLite consensus disorder prediction 243 290 - -
Vivi4g01526 439 MobiDBLite consensus disorder prediction 420 439 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01526 K18404 - gmx:100782461 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01526 4 59087080 59093500 Vivi4g01526 4 59087080 59093500 ECH