Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01522 ATGGCGCAACAAAACGGTTCAAATTGCAAGCACCTAGCAACGTTCCTCATTACCTTGTTCACTCTCATCTCGAGTTCCTCTGGTTGGGTTGGTGTAAACTGGGGAACCATGACCACACACCAGCTTCCACCAACCAAAGTTGTGAAGATGCTTATGCAGAATGGGTTCAAAAAATTGAAGCTATTTGATGCTGATGATACCATTATGATAGCTCTTATGGGTAGTAATATCGAGGTTATGGTTGCAATTCCCAATGTTATGTTGGATAGGATTAGCAACAATCCTAAAGCTGCGGATGCTTGGGTTTATCAAAATGTTACCACTTACTTGTTCCCTGGTGGTGTTAATATCAAGTATGTTGCTGTAGGTAATGAGCCATTCCTCAAAGCATACAAAGGTGAATATCTGAATAAAACTCTTCCAGCTCTCAAGAATATACAGACTTCACTCAACAATGCAGGATTGGGATCAAAGATAAAAGTCACTGTTCCATTCAATGCTGACATTTACTATTCACCAGACACAAATCCAGTGCCATCAGCAGGTGATTTCAGGCCTGAAATAAGAGACATCACAATTGAGATAATCCAATTCCTCTATGCAAATAACTCAACTTTCACAGTTAATATCTACCCTTTCCTTAGCCTTTACGGCAATGATAATTTCCCATTTGATTTTGCATTTTTTGATGGAGAAAACAAACCTCTTAGAGATGGCAAAGCTGTTTATAACAATGTATTTGATGCAAATCTTGATACCCTTATGTGGGCTCTAGAAAAATCAGGTTACCCTGACTTGCATGTCACAGTTGGTGAAGTTGGGTGGCCAACGGATGGTGATAAGAATGCGAATGCCACAAATGCGAAAAGGTTCAACCAAGGTTTCATTAAGCATGCTCTTAGTGGAACTGGTACACCCAAAAGGAAAGGTATGATAGACTTTTATCTATTCAGTCTCCTTGATGAGAATGCTAAAAGTATTGCTCCTGGAAACTTTGAGAGACATTGGGGGATTTTTGAGTTTGATGGAAAACCAAAATATGAATTAGACATAAGAGGTAAACATAAGGACAAGGGTCTTGTTGCTGTTGAAGGTGTTAAGTACCTTCAAAAGAGGTGGTGTGTTTTGGATCCAGAAGCTACTGATTTGGATGATTTGGCTAAAAGTATTGACTATGCTTGTAGCCAATCTGATTGTACTGCACTTGGCTATGGCTCTAGTTGTAATGAACTGAGTCTTCAAGGGAATGCTTCTTATGCTTTCAATATGTATTATCAAGTTAATAATCAGATGGATTGGGACTGTGATTTCACTGGTTTGGCTAAGGTTACACGCGAGGATCCTTCAGAAAATGGCTGCCAATTCCCTTTGATGGTTGCTAGCGGTTCGCGTGCAGGGCTTTCCCAGATGCTGATGAGAGCAATGGAGATATGTCTTTTTGCTATGATTTTCATATAG 1458 0.3978 MAQQNGSNCKHLATFLITLFTLISSSSGWVGVNWGTMTTHQLPPTKVVKMLMQNGFKKLKLFDADDTIMIALMGSNIEVMVAIPNVMLDRISNNPKAADAWVYQNVTTYLFPGGVNIKYVAVGNEPFLKAYKGEYLNKTLPALKNIQTSLNNAGLGSKIKVTVPFNADIYYSPDTNPVPSAGDFRPEIRDITIEIIQFLYANNSTFTVNIYPFLSLYGNDNFPFDFAFFDGENKPLRDGKAVYNNVFDANLDTLMWALEKSGYPDLHVTVGEVGWPTDGDKNANATNAKRFNQGFIKHALSGTGTPKRKGMIDFYLFSLLDENAKSIAPGNFERHWGIFEFDGKPKYELDIRGKHKDKGLVAVEGVKYLQKRWCVLDPEATDLDDLAKSIDYACSQSDCTALGYGSSCNELSLQGNASYAFNMYYQVNNQMDWDCDFTGLAKVTREDPSENGCQFPLMVASGSRAGLSQMLMRAMEICLFAMIFI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01522 485 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 444 IPR044965 GO:0004553|GO:0005975
Vivi4g01522 485 Gene3D Glycosidases 29 359 - -
Vivi4g01522 485 Gene3D - 368 460 - -
Vivi4g01522 485 Pfam X8 domain 373 441 IPR012946 -
Vivi4g01522 485 SUPERFAMILY (Trans)glycosidases 30 350 IPR017853 -
Vivi4g01522 485 SMART X8_cls 372 455 IPR012946 -
Vivi4g01522 485 FunFam Glucan endo-1,3-beta-glucosidase 8 368 464 - -
Vivi4g01522 485 Pfam Glycosyl hydrolases family 17 30 350 IPR000490 GO:0004553|GO:0005975
Vivi4g01522 485 FunFam Glucan endo-1,3-beta-glucosidase 5 29 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01522 Vivi-Chr4 58949107 58951496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01522 30 459 Miscellaneous Gene Families AT2G19440 58.372 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01522 - - gmx:100781894 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01522 4 58949107 58951496 Vivi4g01522 4 58949107 58951496 ECH