Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01464 ATGGCTCCCAAAAATGGAAAAGCCAAACTCCATAAAGTTAAGGGAGAGAAGAAGAAAAAGGAAGAGAAAGTTTTGCCTACTGTTATTGAAATTACGGTTGAAATACCAGATGGTTCACGGGTTACGCTTAAGGGTATATCTACTGACAGGATCCTTGATTTGAGAAAGCTTTTAGCTGTCCATGTTGAGACTTGTCACTTGACTAACTTCTCCCTATGTCATGAGGTGCGAGGTGAGAGGTTGAAAGATAACGTCGAAATCATATCACTCAAACCATGTCATCTCTTAATCGTGCAAGAGGACTACTGCACGGAAGAGTCTGTCGTGACTCATATTCGCAGACTTTTGGACATCACAGCGTGCACCTCAGCCTTCGGGAAACCCACTGGGAAATCCAGTGCAGCTGCCTCGATCGAAAATAGCCCCAAACTCAAACCCAAGGATCAGAATTTGGACTTGGCTGATGGCTCCATGTATCCACCACCTAGACTTGGACAATTCTATGATTTCTTTTCCTTTTCCCACCTTACACCGCCCTTTCAATACATACGAAGATCAAACCGTCCATTCCTTGACGATAAGACAGAGGATGATTTCTTTCAGATTGATGTTAGGATTTGCAGTGGAAAACCAACTACAATTGTTGCCTCTAGGAAAGGATTTTATCCCGCTGGAAAACGTCTTCTTATAAACCATGCATTGGTGCCTCTCCTGCAACACATAAGCAGGGTGTTTGATGCTGCCTATGGAGCTCTTATGAAGGCATTTACGGAACACAATAAGTTTGGAAATCTTCCTTATGGTTTCCGTGCAAACACATGGGTTGTCCCTCCAGTTGTTTCTGACAGTCCAGCAGTATTTCCCTCACTACCCACAGAAGATGAAGCTTGGGGAGGAAATGGAGGTGGTCAAGGAAGCGATCGCAAACATGAAAAGAGACAGTGGGCTAGAGATTTCGCAATCCTCGCTGCAATGCCTTGTCAAAATGCAGAAGAGAGGCAGGTTCGAGATAGGAAAGCCTTTCTGCTTCATAGCTTATTTGTAGATGTATCAGTCTTCAAAGCAGTTTCTGCAATAAATCATTTTAAAGATACCAAGCAAAGCTCTTCCAGTAACGTTCCATCGTCTTATGAAGAACGAATTGGTGATTTAACTATTGAGGTGACAAGAGACGTATCTGATGCAAGCATTAAGCTGGACTGCAAAAATGATGGGACTCGGGTTCTTGGATTATCAGAGGAAGAACTTGCTCAGAGAAATTTGCTTAAAGGCATAACTGCTGATGAAAGTGCAGCTGTTCATGATACTTCCACTCTAGGGGCAGTGATTATACGACATTGTGGCTACACAGCTGTGGTAAAGGTTTCCGCTGAGACAGATTTGGCGGGGAGTCCTGATGATTCCTTGGAAATTGATATTGAGGACCAGCCTGAAGGAGGTGCAAATGCATTAAATGTTAACAGCTTGAGGGCGCTATTGCATAAGTCATCCACACCTCAGTCATCTAATGCAGCAGTCCAACGAGTCCAGAGCACAGATATTGATAATTCTCATTCTGCTCGGTCTTTCATAAAGAAAGTTCTCAAAGAAAGTTTTCTAAAATTGAAGGAAGAGGACACTATTCAAAGCAAATCTATCAGATGGGAGCTTGGGGCATGTTGGGTACAACATTTGCAAAATCAAGCTACAGAAAAAACTGAGCCAAAAAAGGCTGAAGAAGCTAAAGTTGAACCATCTGTAAAAGGACTTGGCAAGCAAGGTGGATTACTAAAGGAATTAAAGAAAAAGATTGACATCAAGAACTCGAAAGTCGAACTAGGGAATGGCATTGACACAAACAAGTCTGATGCTACTCAACAGGATTTTGAAAGACAGTGTGAAGAAAAGGAAACTACATGGAGAAAACTACTTCCTGATGCTGCTTATTCTCGCCTTAAGGAATCTAAAACTGATTTTCATCTCAAGTCACCTGATGAATTGATGGAGATGGCACATAAATATTATGACGATGTTGCACTTCCAAAGCTGGTGGCAGATTTTGGGTCCCTTGAACTTTCACCTGTTGATGGAAGAACATTGACTGATTTCATGCACACCAGGGGCTTGCAAATGTCTTCTTTAGGACGAGTGGTTGAACTTGCTGATAAACTTCCTCATGTGCAATCGCTTTGTATACATGAGATGGTTGTTCGAGCCTACAAGCACATCTTGCAAGCTGTTGTTGCAGCTGTTGATAATGATTCTGAAATGGCTTCATCTATAGCATCATGCTTAAATATATTATTGGGAACACCGTCAATTGAAACTAATGATGCTGAAATTACTAGTTGTGATGAACTGAAATGGAAGTGGGTAGAAATCTTCCTTTTGAAGAGGTTTGGATGGAAGTGGAAGCACGAAAGCAGTAATGATTTAAGAAAGTTTGCTATTCTTCGTGGACTTTGCCATAAGGTTGGACTTGAGCTGGTTCCAAGGGACTATGAAATGGAAACAGCATCTCCTTTTCGAAAGTCAGATATTGTAAGCATGGTCCCCATATACAAGCATGTTGCTTGCTCATCTGCTGACGGTCGAACTTTATTGGAATCATCAAAGACTTCTTTGGATAAAGGTAAATTGGAGGATTCTGTCAACTACGGTACAAAGGCACTTTCAAAGTTAGTATCAGTGTGCGGGCCTTACCATAGAATGACAGCAGGAGCTTATAGTCTATTGGCTGTTGTGCTATACCATACTGGTGATTTCAATCAGGCAACTATCTATCAGCAAAAAGCACTCGATATTAATGAAAGAGAGCTTGGACTGGACCATCCTGATACAATGAAAAGTTACGGAGATCTTGCTGTTTTCTATTATCGACTCCAACATACTGAGTTGGCTTTAAAGTATGTTAATCGTGCGTTGTATCTTCTGCACCTAACTTGCGGACCTTCACATCCGAACACTGCTGCCACCTACATCAATGTAGCAATGATGGAAGAAGGATTAGGGAATGTCCATGTTGCGCTGAGATACCTTCACGAGGCTTTAAAATGTAACAAAAGATTACTTGGAGCTGATCATATACAGACGGCAGCGAGTTATCATGCAATAGCCATTGCTCTTTCTTTGATGGAAGCGTACTCTCTTAGCGTTCAGCATGAACAAACAACTCTCCAGATATTGCAGGCCAAACTTGGGTCTGAGGATCTAAGGACTCAGGATGCAGCTGCATGGCTTGAATATTTCGAGTCAAAGGCTCTCGAACAACAGGAAGCTGCACGGAATGGTACACCTAAGCCAGATGCCTCTATCTCCAGCAAAGGTCACTTAAGTGTGTCTGACCTCTTGGATTACATAACACCTGAGGCTGATCTGAAAGCAAGAGAAGCACAAAAAAAGGCCCGTGCCAAGTTGAAGGAAAAACCAGACCAAAATGGGGATATTGCTGCAGAAGAAAATCATAACGAGATACCGAATGATACAATAGCAGAGACTTCAAGTGATAAGGAAAATAAATCTGAAGCTCAATTTCAAGAACTAAAGATTGATAAAGTTGAGTCCAATGACAAAGATCAAACCACTCTCAATGAAAGTAATAAACTGGCACAGGATGACATCTCAGATGAAGGATGGCAGGAGGCTGTTCCCAAAGGTCGTTCACTCATTGGACGCAAGTCATCTTCATCAAAAAGACCTACCCTAGCAAAACTGAATACTAACTTCATGAATAACTCCCAATCATCAAGGTATCGAGGAAAGCCTGCAAACATTTCTTCTTCTCCAAGATCAAATTTAAATGAGACTATTGCGGGGCCCTCCCCGGCTGTTCCAAAGAAGTTTGTCAAGAGCCCAAGCTTCAGCCCTAAGCCGAATGGCTCTAACACCCCTACTGCGGGTGTAGAGAAGTTAGCTGACACAAAGTCAGCTCCAGTCAGCCCAGCTCTAAGCAATCAAACTGCTAAACCAGCTTCTGTTAGTGGAGGTATCAGTCTTCAATCGACGAGTAAGTTATTTTCTTACAAAGAAGTTGCCTTAGCCCCACCTGGAACAATTGTCAAAGCTGTGGCTGAACAGTCACCAACAGGAAATCCCACTGTTGAACAAAACTCTGAGGTGAGCCCGAAAATAATTGCAACAAAGGAGATTCATAAGGGAACCTCAAACGATATCAATGATAATGATCAGAACTCAGTTGGTGAGAAAAAGAAAGAATCTCTCCATGGAGAAGAAAAAGAAAAGAAAATTGATGTAGTGGCAGATGATACAGAAACACTAAAAAGTACTGATGTCAGAAAATCCCAGGAAGCCAATGGTGATGGTGTGATAGAGAAGAATGTTGAAGTTGGAAACATGACAAACACGGAGGTTGAGAAATCTAATTGCGTAAACAATACGACCAATGCTACATCCAAAGGTACATCAGAGATAGAAGCACAAGCAACTTCCCTAACCATTTCAGTTGAAAGTAAAACACAGTTAAACGGCAATGATGCATCTGTATCAAAAGAGGTGGTTACTGAGGGAGATGAGAAACAACTTGACTTTCCCCAACCATCTGAAGGACAAAAACCAGAAGAGACAGAAACGGGAAAAGAACCAACCAAGAAACTTTCAGCAGCTGCACCACCATTTAATCCCTCCACAATTCCAATTTTTGGGTCTGTTCCAGTTCCAGTTCCAAGTTTCAATGATCATGTAGGTATTTTGCCCCCGCCAGTAAATATTGCTCCTTTGCTTCCACGAAGATCTCTCCATCAGTCAGCAACAACTAGAGTTCCATATGGTCCACGAATTTCTGGTGGCTATAATAGACATTATGGAAATCGCATTCCACGAGGTAAGATTATATTTCCCTCAGGTGAGCAGTCTAGTGATGGCAACCCCAACAGCCCTCCAACAATAATGAATCCACATGCCATAGAGTTTGTACCTGGTCAAACATGGGTTCCTCCGAATGGAAATATAGCTTCTCCAGATGGCAATCCAGTATCTCCTAATGGTTTCTCTCCGGTCTCTCCCAATGATGGTACTCCTCCTGAATCACTAAATGATACCCAAGTGAACCAAATTGAGCATCCAACATCTCCAACTACTTCAAATGATTCCGCACAAGTTAAGAACAATCTTCAAAATGAAAAAGATAATGATGAGCAAGTTATTGAAGCTGTTAGTTGTGAAAAGAAGCCAGCAGAGCTAAATCCTCAACAAGACCCACCTGTTAGCGATGAAAATTGTTGTCCTAAAGTTGAAGAAAAGGATATAGACCATAGTCACTCAATTGAGGATGGAGTAACCAACAAGGACACACTAGATGAGATAAATCCAAACAAATGTTGGGGAGATTACAGTGACAATGAAGTTGATACAGTTGAGGTCATAGGTTAA 5367 0.4187 MAPKNGKAKLHKVKGEKKKKEEKVLPTVIEITVEIPDGSRVTLKGISTDRILDLRKLLAVHVETCHLTNFSLCHEVRGERLKDNVEIISLKPCHLLIVQEDYCTEESVVTHIRRLLDITACTSAFGKPTGKSSAAASIENSPKLKPKDQNLDLADGSMYPPPRLGQFYDFFSFSHLTPPFQYIRRSNRPFLDDKTEDDFFQIDVRICSGKPTTIVASRKGFYPAGKRLLINHALVPLLQHISRVFDAAYGALMKAFTEHNKFGNLPYGFRANTWVVPPVVSDSPAVFPSLPTEDEAWGGNGGGQGSDRKHEKRQWARDFAILAAMPCQNAEERQVRDRKAFLLHSLFVDVSVFKAVSAINHFKDTKQSSSSNVPSSYEERIGDLTIEVTRDVSDASIKLDCKNDGTRVLGLSEEELAQRNLLKGITADESAAVHDTSTLGAVIIRHCGYTAVVKVSAETDLAGSPDDSLEIDIEDQPEGGANALNVNSLRALLHKSSTPQSSNAAVQRVQSTDIDNSHSARSFIKKVLKESFLKLKEEDTIQSKSIRWELGACWVQHLQNQATEKTEPKKAEEAKVEPSVKGLGKQGGLLKELKKKIDIKNSKVELGNGIDTNKSDATQQDFERQCEEKETTWRKLLPDAAYSRLKESKTDFHLKSPDELMEMAHKYYDDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMSSLGRVVELADKLPHVQSLCIHEMVVRAYKHILQAVVAAVDNDSEMASSIASCLNILLGTPSIETNDAEITSCDELKWKWVEIFLLKRFGWKWKHESSNDLRKFAILRGLCHKVGLELVPRDYEMETASPFRKSDIVSMVPIYKHVACSSADGRTLLESSKTSLDKGKLEDSVNYGTKALSKLVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVSDLLDYITPEADLKAREAQKKARAKLKEKPDQNGDIAAEENHNEIPNDTIAETSSDKENKSEAQFQELKIDKVESNDKDQTTLNESNKLAQDDISDEGWQEAVPKGRSLIGRKSSSSKRPTLAKLNTNFMNNSQSSRYRGKPANISSSPRSNLNETIAGPSPAVPKKFVKSPSFSPKPNGSNTPTAGVEKLADTKSAPVSPALSNQTAKPASVSGGISLQSTSKLFSYKEVALAPPGTIVKAVAEQSPTGNPTVEQNSEVSPKIIATKEIHKGTSNDINDNDQNSVGEKKKESLHGEEKEKKIDVVADDTETLKSTDVRKSQEANGDGVIEKNVEVGNMTNTEVEKSNCVNNTTNATSKGTSEIEAQATSLTISVESKTQLNGNDASVSKEVVTEGDEKQLDFPQPSEGQKPEETETGKEPTKKLSAAAPPFNPSTIPIFGSVPVPVPSFNDHVGILPPPVNIAPLLPRRSLHQSATTRVPYGPRISGGYNRHYGNRIPRGKIIFPSGEQSSDGNPNSPPTIMNPHAIEFVPGQTWVPPNGNIASPDGNPVSPNGFSPVSPNDGTPPESLNDTQVNQIEHPTSPTTSNDSAQVKNNLQNEKDNDEQVIEAVSCEKKPAELNPQQDPPVSDENCCPKVEEKDIDHSHSIEDGVTNKDTLDEINPNKCWGDYSDNEVDTVEVIG 1788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1614 1628 - -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1486 1535 - -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1124 1187 - -
Vivi4g01464 1788 SUPERFAMILY TPR-like 866 970 IPR011990 GO:0005515
Vivi4g01464 1788 Pfam Translation initiation factor eIF3 subunit 135 685 828 IPR033646 -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1124 1322 - -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1389 1432 - -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1304 1322 - -
Vivi4g01464 1788 ProSiteProfiles Clueless (Clu) domain profile. 293 569 IPR025697 -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 291 310 - -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1216 1264 - -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1374 1441 - -
Vivi4g01464 1788 CDD CLU-central 687 829 IPR033646 -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1738 1762 - -
Vivi4g01464 1788 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 854 1104 - -
Vivi4g01464 1788 Gene3D Tetratricopeptide repeat domain 853 1136 IPR011990 GO:0005515
Vivi4g01464 1788 SMART tpr_5 941 974 IPR019734 GO:0005515
Vivi4g01464 1788 SMART tpr_5 899 932 IPR019734 GO:0005515
Vivi4g01464 1788 SMART tpr_5 983 1016 IPR019734 GO:0005515
Vivi4g01464 1788 Pfam Tetratricopeptide repeat 982 1056 - -
Vivi4g01464 1788 Pfam Tetratricopeptide repeat 898 968 - -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1724 1777 - -
Vivi4g01464 1788 SUPERFAMILY TPR-like 936 1054 IPR011990 GO:0005515
Vivi4g01464 1788 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 11 1381 IPR027523 GO:0006996
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1644 1697 - -
Vivi4g01464 1788 ProSiteProfiles TPR repeat profile. 899 932 IPR019734 GO:0005515
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1280 1295 - -
Vivi4g01464 1788 Coils Coil 1700 1720 - -
Vivi4g01464 1788 Pfam Mitochondrial function, CLU-N-term 48 118 IPR028275 -
Vivi4g01464 1788 MobiDBLite consensus disorder prediction 1610 1697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01464 Vivi-Chr4 54632947 54644611 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01464 K03255 - gmx:100806823 2561.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01464 4 54632947 54644611 Vivi4g01464 4 54632947 54644611 ECH