Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01438 ATGGCATGCTTGGCAGCAGCCTCATCTACTACCTCACTTGTCTTTTCTTCCTCCTTCTGCTCCTCTCGTCTCTTCGTCAGAACACTCTCCCTAAGGTCCACTTCATCACCACCGCGTCTATTTTTCACCACTGCAGTTCCTCTCCGCAGCCTCATGGCTCGCGCTACTCTCGGCTTCACTCACCCCTCCATCAAGGAAACCCCCAAGCTATCTTTTACGGCCAAGGATACTGACGTGGCGGAATGGAAAGGGGACCTGTTAGCCGTTGCCGTGACGGAAAAGGACGTAGCTAGGGACGGCGAGTCCAGATTCCAGAATCCAATTTTGAGCGCGCTGGATTTAAAATTGGGCGGGTTATTAGCTGAAGCCTCGTTGGAAGAGGACTTCACTGGAAAAGTTGGACAGTCAACGATTCTCCGTATTGCAGCTGGAATTGGATCCAAGAGAGTTGCATTGCTCGGCCTCGGAGCTTCTGCTTCTGGTCCGGCAGCCTTTCAAAGCCTTGGTGAGGCTGTTGCTGCTACTGCTAAGTCCGCTCAGGCTGCCCATGTCGCTGTCGTTTTAGCTTCTTCTCAAGGAGTCTCCTCCCTTAACACCGCTTCTGCCATCGCCACTGGGACCGTTCTGGGAACATTTGAGGATACCAGGTACAAAACGGAGTCGAAGAAATCGTCCCTTAAGTCAGTCGACATTATTGGTCTCGGAACAGGGCCTGAAGTGGAGAAGAAACTAAAGTATGCAGGAGACCTTTCTTCTGGAATCCTTCTTGGAAGGGAGCTTGTAAATTCTCCAGCTAATGTTCTCACACCAGGAGTATTGGCAGAAGAAGCATCTACAATTGCTTCCGCATATAGTGATGTTTTTACTGCCAAAATATTGGATGCTGAACAGTGTAAGGAACTGAAAATGGGATCCTATCTGGCAGTGGCTGCAGCCTCCGCAAATCCTCCTCATTTTATCCATTTGCATTATAAACCTCCAACCGGACCTGTCAATGTCAAGTTGGCGTTAGTTGGAAAAGGTTTGACTTTCGATAGTGGTGGCTACAACATAAAGACAGGACCTGGCTGTATGATTGAGCTCATGAAATTTGATATGGGTGGATCTGCTGCAGTTCTTGGAGCAGCAAAAGCTCTTGGACAAATCAAACCTCTTGGAGTGGAGGTTCATTTTATAGTTGCAGCTTGTGAGAATATGATAAGTGGAACAGGTATGAGGCCTGGAGACGTTCTCACAGCTTCAAATGGAAAAACTATAGAGGTTAACAACACAGATGCTGAGGGGAGGCTTACTCTAGCAGATGCTCTGGTGTATGCTTGTAACCAAGGTGTTGATAAGATAATTGACTTGGCAACATTAACTGGGGCATGCATAATTGCTCTAGGACCCTCAATTGCAGGTGCATTTACACCCAGCGATGAGCTGGCTAAGGAAGTTTTTGATGCTTCTGAAGTGAGTGGGGAAAAACTATGGAGGTTGCCAATAGAAGAAAGTTACTGGGAATCAATGAAATCTGGAGTTGCTGATATGGTGAACACTGGTGGTCGACAAGGTGGTGCTATCACTGCAGCTCTTTTCTTAAAGCAGTTTGTTGACGAAAAGGTTCAATGGATGCATATTGATTTAGCTGGTCCTGTGTGGAATGAAAAGCAGCGTTGTGCAACAGGATTTGGTGTATCAACTTTAGTGGAATGGGTATTGAAGAATGCATCTTAA 1716 0.4697 MACLAAASSTTSLVFSSSFCSSRLFVRTLSLRSTSSPPRLFFTTAVPLRSLMARATLGFTHPSIKETPKLSFTAKDTDVAEWKGDLLAVAVTEKDVARDGESRFQNPILSALDLKLGGLLAEASLEEDFTGKVGQSTILRIAAGIGSKRVALLGLGASASGPAAFQSLGEAVAATAKSAQAAHVAVVLASSQGVSSLNTASAIATGTVLGTFEDTRYKTESKKSSLKSVDIIGLGTGPEVEKKLKYAGDLSSGILLGRELVNSPANVLTPGVLAEEASTIASAYSDVFTAKILDAEQCKELKMGSYLAVAAASANPPHFIHLHYKPPTGPVNVKLALVGKGLTFDSGGYNIKTGPGCMIELMKFDMGGSAAVLGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDVLTASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKIIDLATLTGACIIALGPSIAGAFTPSDELAKEVFDASEVSGEKLWRLPIEESYWESMKSGVADMVNTGGRQGGAITAALFLKQFVDEKVQWMHIDLAGPVWNEKQRCATGFGVSTLVEWVLKNAS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01438 571 PANTHER LEUCINE AMINOPEPTIDASE-RELATED 87 570 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vivi4g01438 571 CDD Peptidase_M17 102 566 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vivi4g01438 571 ProSitePatterns Cytosol aminopeptidase signature. 423 430 IPR000819 GO:0006508|GO:0046872|GO:0070006
Vivi4g01438 571 SUPERFAMILY Macro domain-like 71 253 IPR043472 -
Vivi4g01438 571 Gene3D Zn peptidases 241 571 - -
Vivi4g01438 571 SUPERFAMILY Zn-dependent exopeptidases 252 568 - -
Vivi4g01438 571 Hamap Probable cytosol aminopeptidase [pepA]. 72 571 IPR023042 -
Vivi4g01438 571 Pfam Cytosol aminopeptidase family, N-terminal domain 89 220 IPR008283 GO:0006508|GO:0070006
Vivi4g01438 571 Gene3D Leucine Aminopeptidase, subunit E, domain 1 46 240 IPR043472 -
Vivi4g01438 571 FunFam M17 leucyl aminopeptidase 242 571 - -
Vivi4g01438 571 Pfam Cytosol aminopeptidase family, catalytic domain 257 563 IPR000819 GO:0006508|GO:0046872|GO:0070006
Vivi4g01438 571 PRINTS Cytosol aminopeptidase signature 419 439 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vivi4g01438 571 PRINTS Cytosol aminopeptidase signature 447 462 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vivi4g01438 571 PRINTS Cytosol aminopeptidase signature 397 418 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vivi4g01438 571 PRINTS Cytosol aminopeptidase signature 359 380 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Vivi4g01438 571 PRINTS Cytosol aminopeptidase signature 335 352 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01438 Vivi-Chr4 53272234 53286875 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01438 K01255 - gmx:100808230 864.374