Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01239 ATGCTTTCTCTCACATCATCACAACGTTCTTGTTCTTTCCTCTTCATTCTCTTCTCTCTCTCCATCTTCTCTCTCTCCACCTACGCTAAAACCTCTCCTTTTCATTCCCAACATATTCCAGATGGTGTTGAGGTTGTTGATGGTGAGGTGTTACCATGGAAAACGAGGAGATCTATGGCGGAAGGAGCTGTTCCGCCAAACGCGTCTTTGATATTGGCTCAAGAAAGGACTACGAGAAAAGACCCTATTGATCATTTCAACCTTTATAGAGGTGGTTGGAATATCAGCGATCAACATTACATTGCTTCTGTTGTTTTTACTGCAGTTCCATTCTTTATCATTGCTGTGGTTTGGTTTGTGATTTTTGGGCTTTCTTTATCCTTCATATGCTTGTGTTACTGCTGTTGTCCAAGACAGCCTTATGGCTATTCACGTGTGGCCTATGCTTTGTCCTTGATCCTTCTCATCCTCTTCACCCTTGCAGCAATAGGTGGATGTATTGTGCTTTACACTGCTCAAGGAAAGTTTCATGGGAGCACCTCGAATATGCTGGAATATGTAGTGAGTCAAGCTGACTTCACTGCAGAAAACCTCAGGAATGTGTCAGATTATCTTGGTGCAGCCAAGAATATTGGAGTCGATGCTGTTGTTTTACCCGCTGATGTTCAGAAGAACATAGAAAATATAAAAACATTAATTGGTTCTGCTTCTGTGGAACTTTCCACCAAAACTCATGAAAATTCGAAGAAAATTCAGGCTGGCATAGACGGAATGAGATTGGCTCTAGTTATTCTTGCTGCTGTTATGCTCTTTATTGCTTTTCTCGGATTCTTGTTTTCAATATTGGGAATGCAAGGTCTTGTATACTTTTTGGTATTTGTCGGATGGTTTCTCGTTGCCGGCACGTTTATACTATGTGGTGTATTTCTTTTTCTTCACAATGTCGTTGGGGATTCATGTGTTTCGATGGACGAGTGGGTTCAGAACCCAACTTCACATACAGCACTGGATGAAATTCTTCCATGCGTGGATAATGCAACTGCACAACAAACCTTGTTACAAAGCAGGGATGTTACGAACCAGCTAGTTATGTTGGTTGACAAAGTCATTAATGGTGTCACAAACCGAAACTTACCACCTCAAGCCGGAGCTGCATATTACAATCAATCGGGACCCCTCATGCCTCTTCTGTGCAATCCTTACAACCCCGACCTTACTGTTCGGCAATGTACCCCCAACGAAGTTGCACTTGACAATGCTACTGAGGTTTGGAAGAAATATATATGCAATGTTTCTCCTGCAGGCATCTGTGCGTCGCCTGGTCGAATGACCCCGGGCATTTCTGCCCAAATCGAATCTGCTGTCAATGTAAGCTATGCGTTACATCATTATGTTCCATTCTTGGTCGAGCTACAAGACTGCACTTTTGTGCGTAAAACATTCACCGACATAAGCAGAGATCATTGTCCCGGCTTGCGCAAAAACAGTCGATGGATTTACATTGGACTAGTTACAGTTTCTGGTGGTGTAATGCTGTCAATGATCCTTTGGGTCGTTTATGCGAGAGAGCGGCGACATCGTGTTTACACCAAACAGTTCATTGCTGGATAA 1611 0.4295 MLSLTSSQRSCSFLFILFSLSIFSLSTYAKTSPFHSQHIPDGVEVVDGEVLPWKTRRSMAEGAVPPNASLILAQERTTRKDPIDHFNLYRGGWNISDQHYIASVVFTAVPFFIIAVVWFVIFGLSLSFICLCYCCCPRQPYGYSRVAYALSLILLILFTLAAIGGCIVLYTAQGKFHGSTSNMLEYVVSQADFTAENLRNVSDYLGAAKNIGVDAVVLPADVQKNIENIKTLIGSASVELSTKTHENSKKIQAGIDGMRLALVILAAVMLFIAFLGFLFSILGMQGLVYFLVFVGWFLVAGTFILCGVFLFLHNVVGDSCVSMDEWVQNPTSHTALDEILPCVDNATAQQTLLQSRDVTNQLVMLVDKVINGVTNRNLPPQAGAAYYNQSGPLMPLLCNPYNPDLTVRQCTPNEVALDNATEVWKKYICNVSPAGICASPGRMTPGISAQIESAVNVSYALHHYVPFLVELQDCTFVRKTFTDISRDHCPGLRKNSRWIYIGLVTVSGGVMLSMILWVVYARERRHRVYTKQFIAG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01239 536 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 65 525 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01239 Vivi-Chr4 40184414 40188075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01239 - - gsj:114387485 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01239 4 40184414 40188075 Vivi4g01239 4 40184414 40188075 ECH
Vivi1g01463 1 30418231 30422714 Vivi4g01239 4 40184414 40188075 ECH
Vivi1g01463 1 30418231 30422714 Vivi4g01239 4 40184414 40188075 PCT