Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01234 ATGGACTGGTTCTCTTGGTTATCCAAGACCAACCTAGACCCTTTTCTACTCTACGAGTATAGCCTCACTTTCACCCGCAACGAGCTTCAACTACAAGACTCAATCCACTTCACCCATGAGTTTCTCCAAAGCATGGGAATTTCAGTTGCCAAACACAGGCTAGAAATTCTCAAGCTTGTCAACAACCAAAACAACAAAGTGCCAAAAGACACCAAGAAGTTTTCTTTGGTTAAGTGTATAAAGAAATGTCTAAGCAAACTCATTTTCCATGAAGAAGAAAAAAACAAGAACATGATTTCAATGCAACAAGAGCAAAGTTGGAACCAAGGGAAATGGAGAAGAGCATTGGTAAGTGAGGAACTCAAAGGAGATAAGGGTATGCATAGAAATAGGAGAATAGCATTTTCAGGGCCTTTGGATGGAAGAATGTATGATGAGAAAATGGTGGTTACCAACAAAAGTATGTTGAAGTTTTCTGGTCCTCTTGATGGAAAGATGAATGAAAGAAAAATGGTTTACACGAATAGAAGTCCTTTGAGAAATAGGCCTATTGAAGGAAGGTTTGTGGGTGCTACAACAAGGAGTCCAAGATTTTCTGGACCAATAAGTCCAAATGATTTTCATTGTCTCTACAACAAGACAGGAGATGATTGTGATTTTGAGGATGCTGAAATGTGGCGTGCATTGTTTGAAGATCTTAAACCAACTTGA 711 0.3896 MDWFSWLSKTNLDPFLLYEYSLTFTRNELQLQDSIHFTHEFLQSMGISVAKHRLEILKLVNNQNNKVPKDTKKFSLVKCIKKCLSKLIFHEEEKNKNMISMQQEQSWNQGKWRRALVSEELKGDKGMHRNRRIAFSGPLDGRMYDEKMVVTNKSMLKFSGPLDGKMNERKMVYTNRSPLRNRPIEGRFVGATTRSPRFSGPISPNDFHCLYNKTGDDCDFEDAEMWRALFEDLKPT 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01234 236 Gene3D - 1 68 IPR013761 -
Vivi4g01234 236 Pfam SAM domain (Sterile alpha motif) 19 61 IPR001660 GO:0005515
Vivi4g01234 236 PANTHER OSJNBA0033G05.11 PROTEIN 1 236 - -
Vivi4g01234 236 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
Vivi4g01234 236 CDD SAM_superfamily 2 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01234 Vivi-Chr4 39934578 39935751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01234 - - vvo:131599085 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01234 4 39934578 39935751 Vivi4g01234 4 39934578 39935751 ECH
Vivi1g01467 1 30668148 30668936 Vivi4g01234 4 39934578 39935751 PCT