Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01214 ATGGATCTTGACAGAGGGAGTTCATCATCAACCATAAGCGCAACTGCACGGGCAAATCCAGGTCGCCCTGTACGACATGGTGCACTCTATCAGTTTAGACAGCAGAACCTTCCAGCATGTAAACCTGTGCTTACACCTGCAGCAGTCATTTCTACATTTCTATTGATGGGTTTAATTTTTATTCCTGTTGGAATTGTTACACTTCGTGCGTCGTATAGTGTTGTTGAAATTGTGGACAGATATGACAATGATTGTGTACCCGAAGAATATAGAGGTAACAAAGTAGCATATGTAAAAGATGACTCAATCCCCAAAAATTGTTCGCGATTCTTGAAGGTACCTAAGTCAATGAGAGCGCCAATTTATGTCTATTATCAACTTGATAACTATTACCAGAACCATCGACGGTATGTCAAAAGTAGAAGTGATCAGCAGCTCTTACATGGACTTGGATACAATGATACCAGTCCGTGTAGACCTTTAGAGTCTTCTAATGATCTTCCTATTGTACCTTGTGGGTTGATAGCATGGAGTTTATTCAACGATACTTATAAGTTCAGTCGTGGACCATCGGAATTGAAGGTTAATAGGAAAGACATCGCATGGAAGAGTGATCGTAATCACAAATTTGGAAAGCATGTTTACACGTTAAATTTTCAGAATGGTACCTTGACTGGAGGTGCAAAGCTGGATCCTAGTATTCCACTAAGTGATCAAGAAGATCTCATAGTTTGGATGCGGACTGCTGCTCTCCCCTCATTCCGAAAGTTGTACGGTAAAATAGAAGAGGATTTGGAGGAAGATGATGTTATAACAGTCAACCTAAAGAATCACTATAACACTTACAGTTTTGGAGGAAAAAAGAAGCTTGTTCTTTCAACATCAAGCTGGCTGGGTGGAAAAAACGACTTCCTTGGATTCGCCAATTTATTTGTTGGGTCCTTTAGCATATTGATCTCCATCGTCTTCCTGTTGCTTCATGTGAAAAGTCCTAGACCTTATGGCGACACGGCCTACCCGTCTTGGAATAAGAAAAGCATTACTAAAAGCAGTTCTAGCTGA 1062 0.4058 MDLDRGSSSSTISATARANPGRPVRHGALYQFRQQNLPACKPVLTPAAVISTFLLMGLIFIPVGIVTLRASYSVVEIVDRYDNDCVPEEYRGNKVAYVKDDSIPKNCSRFLKVPKSMRAPIYVYYQLDNYYQNHRRYVKSRSDQQLLHGLGYNDTSPCRPLESSNDLPIVPCGLIAWSLFNDTYKFSRGPSELKVNRKDIAWKSDRNHKFGKHVYTLNFQNGTLTGGAKLDPSIPLSDQEDLIVWMRTAALPSFRKLYGKIEEDLEEDDVITVNLKNHYNTYSFGGKKKLVLSTSSWLGGKNDFLGFANLFVGSFSILISIVFLLLHVKSPRPYGDTAYPSWNKKSITKSSSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01214 353 PIRSF Lem3/Cdc50 3 345 IPR005045 GO:0016020
Vivi4g01214 353 PANTHER CELL CYCLE CONTROL PROTEIN 50 31 342 IPR005045 GO:0016020
Vivi4g01214 353 MobiDBLite consensus disorder prediction 1 20 - -
Vivi4g01214 353 MobiDBLite consensus disorder prediction 1 17 - -
Vivi4g01214 353 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 69 332 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01214 Vivi-Chr4 38458666 38463582 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01214 K26935 - gmx:100789806 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01214 4 38458666 38463582 Vivi4g01214 4 38458666 38463582 ECH