Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01198 ATGCCATCCCTAAAAATGAAGAGCAAAGTAAGTGCGGGCTGTTTGGCAGAGAGAAATGATCTTCAAATATGTCAAACATCGAAAGTAATTTCCAAAAACCCATGTTCTAAAATCGTGATTTCTGCTCAAGAGGTAGAGATCGACTCAACTATTCAAAATTGTATAAATGTTTCTTCAAGAATGCTGCCCAAAGACATTGCAACTGATCAATCTAATGATGGCAAAGAACATCTGGATTATGAAAACTCTGACTCCCAACACCAGTTTTCTGAACTAACCAATCTCTGTACAGAGAACTTAGAAACAATTTTTTCTCCTGCTTTTGAGCCCATCGAAGTCCATTCACAACATTATACTGAAAAAGGCACAGTGAGCTTTGGTGATACTAACATGGAAGGAGTTGTAGCTGATGAAGGAAGAAACATACGTGGCTTTGAAACATGTGATGTATCTGACTTCTACATTTCTGACATGATCATTACAAACTTACCCTTTTGTGGAAATTCATTGGATGATGATGTCGGTGAAACCAACTACCTATCTGATTTTGGATCCACCGAGCCATCCGTGGTTTGTGCTTCTGAACAGTACACGATCCTGCCTGTTCGTGAAGATGATGCTAAAGTTGGATGTACTCCAGATATCATGTCATGCGGAGAAGGTGCTGTGGTTCGTGAAAGTGCTAGCTTGTATTCTGCTATAGCTCAGATAAGATCCTGCAACCAGGAGTCCGATGTCAAAGATGACTTGGATAAGGAAGAGTGCTTTGATCCACAGTCATTTATCAAGAGTTTACCAGAACTATCAGAAGTAGAATTAAATGACCAGCCCACACTATTTCCTAAGCAATCTCCAAGAAGAAAATCAGTAACCCTTGTGCTTGATTTAGATGAGACCCTTGTTCATTCTACGCTGGAACATTGTGATAACGCAGATTTCACTTTTAACATTTTCTTCAATATGAAAGATTACACAGTATACGTAAAACAGAGGCCTTTCCTCCACACATTCTTGGAGAGAGTATCAGAAATGTTTGAAGTTATTATTTTTACGGCCAGCCAAAGCATATATGCAAAGCAACTACTTGATGTATTGGATCCAGATGAAAAATTTATTTCTCGCCGTGTGTATCGAGAATCATGCCTGTTTTCAGATGGAAATTATACAAAAGATCTTACCATATTGGGTGTTGATCTTTCAAAAGTTGTCATAATTGATAATTCACCTCAGGTTTTCCGGTTGCAAGTGAATAATGGTATTCCCATAAAGAGTTGGTTTGATGATCCATCAGATTGTGCGCTAATGTCATTACTTCCCTTTCTAGAGACATTGGCTGATGCTGATGATGTGCGTCCTATCATTGCAAAGAGATACGGTAACAAAGAATAA 1389 0.3859 MPSLKMKSKVSAGCLAERNDLQICQTSKVISKNPCSKIVISAQEVEIDSTIQNCINVSSRMLPKDIATDQSNDGKEHLDYENSDSQHQFSELTNLCTENLETIFSPAFEPIEVHSQHYTEKGTVSFGDTNMEGVVADEGRNIRGFETCDVSDFYISDMIITNLPFCGNSLDDDVGETNYLSDFGSTEPSVVCASEQYTILPVREDDAKVGCTPDIMSCGEGAVVRESASLYSAIAQIRSCNQESDVKDDLDKEECFDPQSFIKSLPELSEVELNDQPTLFPKQSPRRKSVTLVLDLDETLVHSTLEHCDNADFTFNIFFNMKDYTVYVKQRPFLHTFLERVSEMFEVIIFTASQSIYAKQLLDVLDPDEKFISRRVYRESCLFSDGNYTKDLTILGVDLSKVVIIDNSPQVFRLQVNNGIPIKSWFDDPSDCALMSLLPFLETLADADDVRPIIAKRYGNKE 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01198 462 Gene3D - 276 458 IPR023214 -
Vivi4g01198 462 Pfam NLI interacting factor-like phosphatase 291 451 IPR004274 -
Vivi4g01198 462 ProSiteProfiles FCP1 homology domain profile. 285 444 IPR004274 -
Vivi4g01198 462 CDD HAD_FCP1-like 291 422 - -
Vivi4g01198 462 PANTHER DULLARD PROTEIN PHOSPHATASE 131 455 - -
Vivi4g01198 462 NCBIfam dullard-like phosphatase domain 290 454 IPR011948 GO:0016791
Vivi4g01198 462 FunFam CTD small phosphatase-like protein 2 278 458 - -
Vivi4g01198 462 SMART forpap2 288 432 IPR004274 -
Vivi4g01198 462 SUPERFAMILY HAD-like 280 455 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01198 Vivi-Chr4 38158993 38166172 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01198 K17616 - gmx:100799803 751.125