Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01175 ATGGGGTGTGTGTTATCAAGTTTTGATGAGGATGAAAGAGTTAGAATATGTAAGGAAAGGAAGAAGGTGATAAAACAGCTAGTGTGTAATAGAGAGGAGTTTTCTGATTCCCTGCTAGCTTATTTGAAAGCTTTGAGGAACACCGGCGGTACGCTCAGGCAGTTCACCGAGTCCGATATTTTAGAGTTGGACTTTGCATCTACTGGCCTGCCTGACCCTCCACCTTCCCCGCCGCCTAATTTGCTACTGCCACCGCCGGTGCCTCCTTTTCTTGTTGACAAGGGTATGCCGCGCGTTGGCCAAGATGAAATGCTGGAGAATGATGATGTTGATCCAATTATGAACTCGATGTTGCTATTTCGACCGATGGATAAAGTAGAAGGGGTGGAGTCGTTGGAGGAGGAGAATTGGGAAGAAACCAAAACGGAATTCGAAGATGAAGTCCATGACTCGGAAGGTGATGCGAGTGCTAGAAGATTACGCAATGGGAAGCAACAGGTTAGAGAACCAGTTGATGATAATAATCCATCTGCCATTTGTTTGTTTAAAAAAGAAACTCACGACGCTAAGAAAGCTACGCCCAAGCAGGCTGGTAGAAATGCCAAAACCTTGGAGGGTATAGTTAAAGAGTTAGATGATCATTTCCTGAAAGCATCGGCATGCATAAAGGAAATTGCTGTTCTCATTGATATCAGCAGCGGAGATACTCTTCTACGCCAGAATTCTGGACGTCATCTTAGCAAGAGAACCAATTCTGCAAGGGTGTTTAGTGTGCTGTCATGGAGTAGGCATACTAAGTCGCCCACATTCACTAAAGATGACGCCGAGTTTTCTAGTCCTAGTGAACCATGCAGGCCTGGAGCTCATTGTGCCACGCTTAAAAAACTATACGCCGCAGAGAAGAAACTTTACAAAACAGTCAAGGAAGAGGGAGTTACCAAATTGGAGTTTGAGAGGAAGTCTGCCTCATTGCAGAAAGAAGATGAGAATCTCGATTCAGCCAAAATCGAAAAAATTCGATCAAATGTTGAGAAGTTAGAGTCTGATTTAATAAGCCTACGGCAGTGTATCAGTGAAACATCATCGTCAATTTTAGAACTTATAGACGAAGAACTCTTACCGCAACTGGTTGCATTAACTGCCGGGTTGTCGCAAATGTGGAAGATAATGCATGAGTGTCATCAGTCCCAGACTCTGATCTCTCAGCAGTTGAGTAAACTCAGCGATAACCATAACACAATTCTAAGTTCCGAATATCATCACCAGGCTACAATTCAGTTCGAGAGTGAGGTCTCTTATTGGTATACTAGCTTCTGCAAACTTGTAAAATCGCAACGAGAGTACGTAGGGACCCTCAGTAAATGGATCAAGCGTACGAACTGCCTCAGGGAGGGTCATGAAAGCGGTGATCACTCTTCTGTTCGCACCATTTGTGAACAGTGGGAGCCTGGCCTTGATGGATTACCTGATAAAGAGGTCGCCGATGCGATAAAAAACCTTTTGGTATCCATCCGTTCAATAATTGCTCAACAGGCCGAGGAAGATAACATTCTGAAAAAGTTGGAAAAACTTGAAAGAAAGTTGCTGAGGTGTTCTGCGTCCCTGGCTGTCATACAGAAAAAAATGGAATGGAACTTCGAAGAAGACGACCGCGATGTAGCCAATATAAGCCCGAGACATCCGCTGTTTCAGAAAAAAGCTGAAACAGAAGCTTTGAAGAAGCAAGTGGAAAGTGTGAAAGCAGATTATTTGGGTTCTGTTCAATGTAGTAGGACCATGACACTAGATAGCCTCCGAACTCGACTTCCTCATCTCTTCTTGTCACTGATGGAATTTGCAAGTGCTTCCTCTCAAGCAATTGAGGCTATAAATTCTCAGTCAAGCCAATAG 1890 0.4397 MGCVLSSFDEDERVRICKERKKVIKQLVCNREEFSDSLLAYLKALRNTGGTLRQFTESDILELDFASTGLPDPPPSPPPNLLLPPPVPPFLVDKGMPRVGQDEMLENDDVDPIMNSMLLFRPMDKVEGVESLEEENWEETKTEFEDEVHDSEGDASARRLRNGKQQVREPVDDNNPSAICLFKKETHDAKKATPKQAGRNAKTLEGIVKELDDHFLKASACIKEIAVLIDISSGDTLLRQNSGRHLSKRTNSARVFSVLSWSRHTKSPTFTKDDAEFSSPSEPCRPGAHCATLKKLYAAEKKLYKTVKEEGVTKLEFERKSASLQKEDENLDSAKIEKIRSNVEKLESDLISLRQCISETSSSILELIDEELLPQLVALTAGLSQMWKIMHECHQSQTLISQQLSKLSDNHNTILSSEYHHQATIQFESEVSYWYTSFCKLVKSQREYVGTLSKWIKRTNCLREGHESGDHSSVRTICEQWEPGLDGLPDKEVADAIKNLLVSIRSIIAQQAEEDNILKKLEKLERKLLRCSASLAVIQKKMEWNFEEDDRDVANISPRHPLFQKKAETEALKKQVESVKADYLGSVQCSRTMTLDSLRTRLPHLFLSLMEFASASSQAIEAINSQSSQ 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01175 629 Coils Coil 336 356 - -
Vivi4g01175 629 MobiDBLite consensus disorder prediction 142 168 - -
Vivi4g01175 629 Pfam Protein of unknown function (DUF632) 205 505 IPR006867 -
Vivi4g01175 629 Coils Coil 507 541 - -
Vivi4g01175 629 MobiDBLite consensus disorder prediction 135 176 - -
Vivi4g01175 629 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Vivi4g01175 629 PANTHER UNCHARACTERIZED 1 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01175 Vivi-Chr4 36523535 36526699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01175 1 60 Acyl Lipid Metabolism Gene Families AT2G27090 35.000 2.07e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01175 - - gmx:100809759 720.309