Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01172 ATGGAAGTGCCGTTGGAGTCTGAGAAGAAAAAATCTTCCGAAGCTGTTAAAACGGTTTCAGCTGGTTCGGTTTCCTCGAGAAAAAGAGTCGAGGCCCGGAACGTAACGGATTCAGGTTCGGTTACAAAGAGATCAGGTTCGGGTTCAGGTTCAGTTAGTTCGAGTTCAGTACCGAGAAGAAACAGTACCGGAGGGCTAGCACAACGGTCTTCGTTATCATCAGATGGAAGAACTAAAACTACTGGTAGAGATAAAACTGTTTCTTCTTCGGTTACTGAACCAGTGCGAAGATCTCTCCCGGAGATTCGCCGGAGTTCGATTTCTGCTTTGCATGCTGGTAAGCCGGTTGCTGCCGTCTCGCCGGTGGGAACAAGGACGTCAACCGTTTCTGGTTCGAGTTCGAGTAAGGCGGAAGTTGTTAAGAGGCCGTTAAGTAAGCCGGCGTTGTCGGTTTCTGCTTCTTCATCCTCGTCGAGGAGAGTTGCTTCTTCAAGTGTTGATGTTAGTGGCGGTGGTGCTGTTAGGAAGAGTGTGGCGAAGGTTTCGTCGCCGTCAATGTCGGCAGGGTCGCCGACTGTGTCTGGAGGGTTGAGAGCGGGATCTATGTCAGCTTCTTCGGATAGGAGTTCTGGTTTGTCTGGGAGGAAGAAAGTGGGGACTCCTGATAGCCGGAATTCACGGTTTATTGTTCTTCCGCAGATTGAGGTTAAGGCTAGTGATGATTTGAGATTGGATCTTAGGGGACACAGAGTTCGCAGTCTCACTGCTGGTGGATTAAACTTATCCTCAAATTTGGAGTTTGTCTATCTCCGTGACAATCTCTTGTCTACATTGGAAGGAATAGAAGTACTGACAAGAGTGAAGGTTCTTGATTTGAGTTTTAATGATTTTAAAGGGCCTGGATTTGAGCCTCTCGAGAGTTGCAAAGTACTGCAGCAACTCTATCTTGCTGGAAATCAAATCACATCATTGGCAAGTCTCCCGCAACTTCCCAATTTGGAGTTCCTCTCAGTAGCTCAAAATAAGTTGAAATCTCTCACTATGGCAAGTCAACCTCGACTCCAGGTGTTAGCTGCCAGCAAAAACAGAATTACCACACTTACAGGTTTTCCATATTTACCAGCTCTTGAGCATTTGCGAGTGGAGGAGAACCCTATACTGAAGATGCCTCATTTGGAAGCAGCCTCAATATTGCTTGTTGGGCCTACTTTAAAAAAATATAATGATAGAGATCTCTCTCGTGAAGAAATTGCAATAGCAAGACGATATCCTGCACATACAGCTTTGTGCATTAGAGATGGTTGGGAATTTGGTCGCCCTGATCAAGCTGCAGAGTCAACTTTCCGCTTTCTAGTTGAGAAATGGAAGGATCATCTTCCACCTGGTTTTTTTCTCAAAGAAGCTGCAATAGATAAACCATTGGAAGAAGATGTGTGCCGCAGTCACTTCACATTTGTTCATGATGGTGCACTGAGTACAGACCCACCCTTAGTCTTAAAGTATCAATGGTTTTGTGGTGATGTAGCACTGTCAAATTTTGTCCCTATTCCAGAGGCCACTGATGAGTTTTACTTGCCAAAACACGATGAGATTGGAAAAATTCTGAAAGTGGAATGTACTCCCTCTTTAGGAGAGACAGAATATCCTTCTATATTTGCCATCTCTTCTCGTGTTAAACCAGGGAGTGGAATTCCAAAGGTTATAAACCTTGAACTCCACGGGGAACTGATAGAAGGAAGTATCATCCGAGGTAGTGCTAAGGTTGCATGGTGTGGTGGGACTCCAGGAAAGGGTGTTGCTAGTTGGCTGCGGAGAAAGTGGAACAGTAGTCCAGTGGTCATTGTTGGGGCAGAAGATGACGAGTATCAGCCCACCATTGATGACGTTGATTCAAGTTTAGTTTTCATGTACACACCAGTAACAGAAGAAGGTGCCAAAGGAGAACCTCAATATAAATATACAGATTTTGTAAGAGCTGCTCCCCCTTCAGTCAGTAATGTTAGAATAGTTGGAGATGCTGTCGAAGGAATCACCATTAAAGGAGTAGGTGATTATTTTGGCGGACGGGAGGGACCTAGCAAGTTTGAGTGGCTACGAAAGAACAGGGATACTGGAGATTTTCTGTTAGTGTCAGCTGGTACATCTGATTATACCTTGACCAAAGAAGATGTTGGCTGTTGTCTGACTTTTATATACATACCGATTAATTTTGAAGGCCAGGAAGGAAAATCGTTGTCTGTGACGTCCTCTGTTGTAAAACAAGCTCCACCAAAAGTAACAAATGTCAAAATAATTGGTGATCTACGAGAGAATGGAAAAGTCACTGCGACTGGTATTGTAACTGGAGGAACTGAAGGATCTAGCAGAGTTCAATGGTACAAAACATATTTGCCAACTTTGGATGAAAGCAATCTTGAAGCATTAAGTACTTCTAAAATTGCTAAAGCATTTCGGATTCCTCTTGGAGCTGTGGGCTGTTACATTGTTGCAAAATATACACCGATGACTCCTGATGGTGATTCTGGAGAACCAACATTTGTAATATCTGATAGAGCAGTTGAGACACTTCCCCCAAGCTTAAATTTCTTATCAATCATTGGAGATTACTGTGAGGATGGAATATTGACAGCTTCATATGGATATGTTGGAGGTCATGAAGGAAAAAGTATATACAATTGGTATTTTCATGAGGTTGAAGGTGATTTTGGTTCTCAGATACCGGGGGTTTCTGGACTTCTGCAGTATCGCATTACCAAAGAAGCTATTGGAAAATTCATCTCATTCCAATGTACTCCTGTTCGGGATGATGGGGTTGTGGGTGACAAAAGAATTTGCATGGGCCAGGAACGCATTCGCCCTGGAAGCCCAAGATTGCTTTCTTTGCGCACAGTTGGGAATGCAGTTGAAGGAACAACACTAAGAATTGAAAAAACGTATTGGGGCGGTGAAGAGGGAGATTCAGTTTACCGCTGGCTTAGGACCAATTCTGAGGGTGTCCAAAGTGAAATTATGGGCGCCACCACAGCATCATATATGCTCTCCATTGATGATATTGGTTTCTTTATTTCTGTTTCTTGTGAGCCTGTCCGAAGTGATTGGGCCCGCGGACCCATTGTTCTCTCAGAACAAATTGGACCTATAATACCTGGTCCACCAACATGTCATACTTTGGAAATTCTTGGATCAATGATGGAAGGGCAGCGATTGAATTTCAATGCTGTGTATAGTGGAGGGGAGAGGGGGGAATGCACCCACCAATGGTTTAGGGTAAAAGACAATGATCTACGAGAGAAAATAACTACTCAAGATTTTTTGGATTTGACTCTTGATGATGTTGGTGCCTGCATTGAGCTTGTCTTCACACCTGTGTGCAAAGATGGAACTAAAGGCAATCCAAAGAATGTGGTATCTGATATGATTTCTCCTGCGGATCCTAAGGGAATAGAGCTCACAATTCCTGACTGTAGCGAAGACAGGCAGGTTACCCCATTTAGGATATATTTTGGTGGACATGAAGGAGTTGGAGAATATATTTGGTACAGAACAAAGATTAAGCTTGAAGGATCTGCACTACTAAATATATCTAATGCTTCTGACATTGAGATATGCGGGACAGAGCTAACGTATAAACCAACTCTGGAAGATGTTGGATCTTTTTTGGCCTTGCATTGGGTGCCAACTCGTGTGGATAGCACTTGTGGAGAGCCTTTGGTGGCAATTTGCAATACCCCAGTTTCCCCTGCACCTCCAGTAGTTGCTAATGTACACGTGAAAGAGTTATCTTTGGGAATTTACTCTGGTGAAGGTGAATATTTTGGTGGATATGAAGGAGAAAGCCTTTTTAGCTGGTATAGAAAAGATAACGAGGGGACTGTTGAGCTGATTAATGGAGCAAGCTCTAGAACCTACGAAGTTACTGATTCAGATTACACTTTTCGTTTGGTGTTTGGATATACTCCAGTTCGTTCAGATTCGGTTGTGGGCGAACTCAAGTTATCTGATCCAACTGACATTGTTTTCCCAGAGCTTCCATATACAGAGATGCTTGCTCTGACCGGAAAGGCAGTTGAAGGTGACTTACTTACAGCTGTTGAAGTGATTCCAAATAGTGAGATGCAGCAACATGTCTGGAGCAAGTACAAGAAAGATATAAGATACCAATGGTTTTGTTCATCAGAAGTGGGCGACAGTTTTTCATATGAGCCATTACCCAATAAAAGCTCTTGCTCGTATAGGGTGCGGTTTGAGGATATTGGCCGTTGTTTGAAATGTGAATGTGTTGTAACTGATGTGTTTGGACGGTCGGGTGAGGTGGTATACAATGAGACAAGTCCTGTATTGCCAGGGATTCCTAGGATACACAAGCTTGAGATTGAGGGAAGGGGATTCCATACCAATCTCTATGCTGTTCGTGGCATTTATAGTGGTGGGAAGGAAGGCAAAAGCAGAGTCCAATGGCTTAGATCAATGGTTGGAAGTCCCGATCTGATCTCTATACCAGGAGAAACAGGCAGAATGTATGAAGCAAACGTTGATGATGTCGGTTATAGGTTGGTGGCCATCTACACTCCTGTCAGAGAGGATGGAGTAGAGGGCCAATCAGTTTCTGTATCCACAGATCCAATTGCAGTTGAGCCTGATGTTCTTAAAGAAGTGAAGCAGAACCTTGATTTGGGATCAGTGAAATTTGAGGTATTGTGTGACAAAGACCAAACCTCGAAAAAGATTTCATCAGTGGGCACATATGAAAGACGTGTTCTTGAGGTAAACAGGAAAAGGGTGAAGGTGGTAAAGCCTGCCACCAAGACTTCTTTTCCAACAACAGAAATCCGTGGTAGTTACGCCCCTCCCTTTCATGTGGAGCTTTTCAGGAACGATCAACACCGTCTAAAAATTGTAGTGGACAGTGAGAATGAAGCTGACTTGATGGTGCAGTCCCGGCACATTCGAGATGTTATTGTTCTCGTGATTAGAGGACTTGCTCAACGATTCAACAGCACTTCCCTCAATTCTCTTCTCAAGATAGAGACATGA 5034 0.4368 MEVPLESEKKKSSEAVKTVSAGSVSSRKRVEARNVTDSGSVTKRSGSGSGSVSSSSVPRRNSTGGLAQRSSLSSDGRTKTTGRDKTVSSSVTEPVRRSLPEIRRSSISALHAGKPVAAVSPVGTRTSTVSGSSSSKAEVVKRPLSKPALSVSASSSSSRRVASSSVDVSGGGAVRKSVAKVSSPSMSAGSPTVSGGLRAGSMSASSDRSSGLSGRKKVGTPDSRNSRFIVLPQIEVKASDDLRLDLRGHRVRSLTAGGLNLSSNLEFVYLRDNLLSTLEGIEVLTRVKVLDLSFNDFKGPGFEPLESCKVLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLTMASQPRLQVLAASKNRITTLTGFPYLPALEHLRVEENPILKMPHLEAASILLVGPTLKKYNDRDLSREEIAIARRYPAHTALCIRDGWEFGRPDQAAESTFRFLVEKWKDHLPPGFFLKEAAIDKPLEEDVCRSHFTFVHDGALSTDPPLVLKYQWFCGDVALSNFVPIPEATDEFYLPKHDEIGKILKVECTPSLGETEYPSIFAISSRVKPGSGIPKVINLELHGELIEGSIIRGSAKVAWCGGTPGKGVASWLRRKWNSSPVVIVGAEDDEYQPTIDDVDSSLVFMYTPVTEEGAKGEPQYKYTDFVRAAPPSVSNVRIVGDAVEGITIKGVGDYFGGREGPSKFEWLRKNRDTGDFLLVSAGTSDYTLTKEDVGCCLTFIYIPINFEGQEGKSLSVTSSVVKQAPPKVTNVKIIGDLRENGKVTATGIVTGGTEGSSRVQWYKTYLPTLDESNLEALSTSKIAKAFRIPLGAVGCYIVAKYTPMTPDGDSGEPTFVISDRAVETLPPSLNFLSIIGDYCEDGILTASYGYVGGHEGKSIYNWYFHEVEGDFGSQIPGVSGLLQYRITKEAIGKFISFQCTPVRDDGVVGDKRICMGQERIRPGSPRLLSLRTVGNAVEGTTLRIEKTYWGGEEGDSVYRWLRTNSEGVQSEIMGATTASYMLSIDDIGFFISVSCEPVRSDWARGPIVLSEQIGPIIPGPPTCHTLEILGSMMEGQRLNFNAVYSGGERGECTHQWFRVKDNDLREKITTQDFLDLTLDDVGACIELVFTPVCKDGTKGNPKNVVSDMISPADPKGIELTIPDCSEDRQVTPFRIYFGGHEGVGEYIWYRTKIKLEGSALLNISNASDIEICGTELTYKPTLEDVGSFLALHWVPTRVDSTCGEPLVAICNTPVSPAPPVVANVHVKELSLGIYSGEGEYFGGYEGESLFSWYRKDNEGTVELINGASSRTYEVTDSDYTFRLVFGYTPVRSDSVVGELKLSDPTDIVFPELPYTEMLALTGKAVEGDLLTAVEVIPNSEMQQHVWSKYKKDIRYQWFCSSEVGDSFSYEPLPNKSSCSYRVRFEDIGRCLKCECVVTDVFGRSGEVVYNETSPVLPGIPRIHKLEIEGRGFHTNLYAVRGIYSGGKEGKSRVQWLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPVREDGVEGQSVSVSTDPIAVEPDVLKEVKQNLDLGSVKFEVLCDKDQTSKKISSVGTYERRVLEVNRKRVKVVKPATKTSFPTTEIRGSYAPPFHVELFRNDQHRLKIVVDSENEADLMVQSRHIRDVIVLVIRGLAQRFNSTSLNSLLKIET 1677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01172 1677 MobiDBLite consensus disorder prediction 1 15 - -
Vivi4g01172 1677 FunFam 187-kDa microtubule-associated protein AIR9 957 1040 - -
Vivi4g01172 1677 Gene3D - 1343 1438 - -
Vivi4g01172 1677 Gene3D - 483 550 - -
Vivi4g01172 1677 Gene3D - 959 1036 - -
Vivi4g01172 1677 MobiDBLite consensus disorder prediction 121 139 - -
Vivi4g01172 1677 ProSiteProfiles Leucine-rich repeat profile. 310 331 IPR001611 GO:0005515
Vivi4g01172 1677 MobiDBLite consensus disorder prediction 180 213 - -
Vivi4g01172 1677 Gene3D Ribonuclease Inhibitor 301 428 IPR032675 -
Vivi4g01172 1677 Gene3D Ribonuclease Inhibitor 232 300 IPR032675 -
Vivi4g01172 1677 SUPERFAMILY Outer arm dynein light chain 1 243 397 - -
Vivi4g01172 1677 MobiDBLite consensus disorder prediction 16 95 - -
Vivi4g01172 1677 FunFam 187-kDa microtubule-associated protein AIR9 isoform X2 1344 1439 - -
Vivi4g01172 1677 MobiDBLite consensus disorder prediction 1 223 - -
Vivi4g01172 1677 FunFam 187-kDa microtubule-associated protein AIR9 300 428 - -
Vivi4g01172 1677 SMART LRR_sd22_2 330 351 - -
Vivi4g01172 1677 SMART LRR_sd22_2 262 283 - -
Vivi4g01172 1677 SMART LRR_sd22_2 284 307 - -
Vivi4g01172 1677 SMART LRR_sd22_2 308 329 - -
Vivi4g01172 1677 PANTHER EXPRESSED PROTEIN 636 743 - -
Vivi4g01172 1677 ProSiteProfiles Leucine-rich repeat profile. 264 285 IPR001611 GO:0005515
Vivi4g01172 1677 MobiDBLite consensus disorder prediction 148 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01172 Vivi-Chr4 36451217 36476319 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01172 - - gmx:100807099 2681.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01172 4 36451217 36476319 Vivi4g01172 4 36451217 36476319 ECH