Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01135 ATGAATTTGAACATCTTCAAGAAGAAAACCTCACCCAAAGAAGCTTTGAGGCAAAGTAAGAGAGACATGTCTGTTGCAACTAGAGGAATTGAAAGAGAGATAGCATCTCTTCAGATGGAGGAAAAGAAGTTGGTGGCAGAGATTAAAAGAGAAGCAAAAACTGGAAATGAGGCTGCTACAAGAATCCTGGCTCGTCAACTTGTTAGGTTACGCCAACAGATAACCAATTTGCAGGGAAGTCGCGCTCAGATCAGGGGTGTAGCAACTCATACACAGGCATTATATGCAAGCACTTCAATCTCTACAGGGATGAAGGGTGCAACTAAAGCAATGGTAGCAATGAATAAGCAAATGGCACCGGCAAAGCAGGCTAAAGTGATTCAAGAATTCCAAAAACAATCAGCACAGATGGACATGACGATTGAGATGATGTCAGAATCTATTGATGAAACTTTAGACAAAGATGAAGCCGAGGAAGAATCAGAAGAGCTCACTAACCAGGTTCTTGATGAAATTGGAGTGGATATTGCATCCCAGTTATCTTCTGCTCCGAAAGGTCGGATTGCGTCAAGGAATACGGAAAATGTTGCTGCAAGATCAGAATCCCAAGATGTTGAAGAACTTGAAAAGAGATTGGCATCTCTCCGAAGAATATAA 657 0.417 MNLNIFKKKTSPKEALRQSKRDMSVATRGIEREIASLQMEEKKLVAEIKREAKTGNEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQAKVIQEFQKQSAQMDMTIEMMSESIDETLDKDEAEEESEELTNQVLDEIGVDIASQLSSAPKGRIASRNTENVAARSESQDVEELEKRLASLRRI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01135 218 Pfam Snf7 19 187 IPR005024 GO:0007034
Vivi4g01135 218 MobiDBLite consensus disorder prediction 182 207 - -
Vivi4g01135 218 Coils Coil 147 167 - -
Vivi4g01135 218 Coils Coil 198 218 - -
Vivi4g01135 218 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 5 216 IPR005024 GO:0007034
Vivi4g01135 218 MobiDBLite consensus disorder prediction 183 199 - -
Vivi4g01135 218 Gene3D - 6 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01135 Vivi-Chr4 35253439 35256962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01135 K12191 - gmx:100777179 368.237