Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01132 ATGGCTTCAAGGAATGGTGAAGAAGAGAAAGTTGAACTTGGCTTCAATGATGTTCTTCATGAGACAAAGTCAAATAAGGATTGGATCCTTTTGTCTCTTAGAGTGGTTGCATTTTTAGCCACTACAGCTGCAACTCTTGTGATGGCACTCAACAAACAGACCAAGAGTTTTGTTGTTGGCACCATTGGTAACAATCCTATAACAGCTACTCTTTCTGCAAAGTTTAATCAAACTCCAGCTTTTATATTCTTTGTGATAGCAAATGGAAATGCTAGTCTCCATAACTTGGTGATGATAGCATTGGATGTATTAGGTCCTCAATATGATTACAAAGGACTTCGTCTCGCATTGATTGCAATATTAGACATGTTAACTATGGCTCTAGCATCAGCCGGAGATGGAGCAGCAACATTCATGTCAGAATTAGGAAGAAATGGTAATTCACATGCAAGGTGGGTTAAGATATGTGACAAATTTGAAAGTTATTGCAATAGAGGTGGTGGTGCACTCATTGCTTCTTTCATTGGCTTCATTCTTCTATTGATTATCACAGTGATGTCCATTGCTAAGCTTCTCAAGCCAAATCGCATTAGCCATGCTGCCAGTCCTTGA 612 0.3922 MASRNGEEEKVELGFNDVLHETKSNKDWILLSLRVVAFLATTAATLVMALNKQTKSFVVGTIGNNPITATLSAKFNQTPAFIFFVIANGNASLHNLVMIALDVLGPQYDYKGLRLALIAILDMLTMALASAGDGAATFMSELGRNGNSHARWVKICDKFESYCNRGGGALIASFIGFILLLIITVMSIAKLLKPNRISHAASP 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01132 203 PANTHER CASP-LIKE PROTEIN 1U1 24 191 IPR044173 -
Vivi4g01132 203 Pfam Casparian strip membrane protein domain 27 179 IPR006702 -
Vivi4g01132 203 NCBIfam plant integral membrane protein TIGR01569 31 190 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01132 Vivi-Chr4 35103340 35104500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01132 - - gmx:100792043 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01132 4 35103340 35104500 Vivi4g01132 4 35103340 35104500 ECH