Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01123 ATGGCATCCTCTGATCCCAACAAGTTGTTAACCAAAGCTGATAAACTAACAAAACTCAGTCTCACTAGGTGGAGTGCTGATTGGAAGACTGCTACTGGTCTTTATGAGCAGGCTGCTATTGGGTTTAGAGCTTCCAAGAATCATGAGAAAGCCAAGTTGGCTTTTGAGAAAGCTTCACAAGGACAAGAGATGCTTTCTTCACCTTGGGATGCAGCTAAGCTCATGGAATCTGCTGCTGCTCTGGCCAAGGAACTGAGCAACTGGAGAGAAGTTGGAGACTTCTATCAAAAGGCATCTCAGTTGTACATGGAGTGCGGTAGACCACAACCTGCATCGGACGCTCTTGCAAAGGGAGCTCGTGCTTTAGAAGATACCATGCCTGAAGAAGCTATTCAGTTATATACAGATGCTTGTACAATTCTAGAAGACGATGATAAGGATCAGATGGCGTTTGATCTATACCGTGCTGTAACTAGTGTTTATATAAAACTTGAGAAATATACAGATGCCGCATCTTCCCTGTTGAGATTGGGCTTGGCAGCTGACAAATGCAATGCTACCAATAGTCAGTCCAAGGCTTATCTTAGTGCCATTATTGTCTACCTTTATGCTCACGACTTTCAGCAAGCAGAGAAATGCTATAATGACTGCTCTCAGATTGAAGCTTTTCTCAAAAGTGACCACAATCGTTGTGCTAGCAAGTTTCTTGCTGCTTACACAGATGGAGACGTCGACGAAATCAAAAAAATTGCTCAGTCTAGCGCTGTTAACCATCTTGACCATGCAATCATTCGGCTCGCGAGGAAACTTCCAACTGGCGATGTGAGTGCATTAAAGACTGCCACGGCCGAAGATGACGAGGAACCACTGGACGAAAATGACCTGACTTAA 891 0.4433 MASSDPNKLLTKADKLTKLSLTRWSADWKTATGLYEQAAIGFRASKNHEKAKLAFEKASQGQEMLSSPWDAAKLMESAAALAKELSNWREVGDFYQKASQLYMECGRPQPASDALAKGARALEDTMPEEAIQLYTDACTILEDDDKDQMAFDLYRAVTSVYIKLEKYTDAASSLLRLGLAADKCNATNSQSKAYLSAIIVYLYAHDFQQAEKCYNDCSQIEAFLKSDHNRCASKFLAAYTDGDVDEIKKIAQSSAVNHLDHAIIRLARKLPTGDVSALKTATAEDDEEPLDENDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01123 296 Gene3D Tetratricopeptide repeat domain 3 272 IPR011990 GO:0005515
Vivi4g01123 296 FunFam Gamma-soluble NSF attachment protein 3 272 - -
Vivi4g01123 296 SUPERFAMILY TPR-like 7 250 IPR011990 GO:0005515
Vivi4g01123 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 275 IPR000744 GO:0006886
Vivi4g01123 296 Pfam Soluble NSF attachment protein, SNAP 5 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01123 Vivi-Chr4 34912394 34915502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01123 K21198 - qsu:111985801 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01123 4 34912394 34915502 Vivi4g01123 4 34912394 34915502 ECH