Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01075 ATGGCTCCAATACGTTCCACTGGATTTGTTGATCCCGGTTGGGATCATGGTATTGCTCAAGATGAGCGCAAAAAGAAGGTTAGATGTAATTACTGTGGGAAAGTTGTTAGTGGTGGGATATACAGATTAAAACAGCATTTAGCTCGAGTTTCTGGTGAAGTAACGTACTGTGAAAAGGCTCCAGAGGAAGTCTATCTTAAAATGAAGGAAAATCTGGAAGGGTGTCGTTCCAATAAGAAACAAAAGCAGGTTGATGCGCAGGCATATATGAATTTCCACTCTAATGACGATGAAGACGATGAAGAGCAAGTTGGGTGTAGAAGTAAAGGGAGGCAGTTGATGGTTGAAAGGAATGCGTCTGTAAATTTGACTCCTCTTCGGTCTTTAGGATATATTGACCCAGGTTGGGAACATGGTGTTGCTCAGGATGAGAGAAAGAAAAAAGTTAAATGCAGTTACTGTGAGAAAGTTGTCAGTGGAGGTATTAATAGGTTTAAACAACATTTGGCTAGAATTCCTGGAGAGGTAGCACCTTGTAAAAGTGCTCCAGAAGAAGTTTATCTTAAAATTAAAGATAATATGAAATGGCATCGCACTGGAAAGAGACATAGGCATCCTGAGGGTAAGGAACTGTTGGCTTTCTACTCGAAGTCCGATAATGATGATGAGGAATACGAGCAACCGGAAGATACTTTGCATCATATAAACAAGGAAGCTTTGATTGATATTGATAGGAGATACTCCAAAGATACAGAAAAGACCTTCAAGGGAATGTCCACTGGCCCAGAACCAGTATTGAGAAGATCGAAATTAGATAGTTTTTACCGGAAACCTCCCACGAATCAGACTCCTACAACTTACAAACATTTAAAAGTTAAGACAGGGTCGTCCACAAAGAAATTACGCAAGGAAGTTATTTCCTCAATATGCAAGTTCTTTTGCCATGCTGGAATTCCTTTACAGGCTGCTGACTCCATATATTTTCATAAAATGCTGGAAATGGCCGGTCAATATGGACAAGGACTGGTATGCCCGCCCAGCCAAGTTATTTCTAGTCGCTTTTTGCAGGAGGAAATCAATTCCATTAAGAATTACCTTATTGAATATAAGGCTTCCTGGGCAATCACTGGTTGTTCTGTACTGGCTGATAGTTGGAGAGATACCCAGGGTAGGACAATTATAAACTTTCTTGTTTCATGTCCTCACGGTGTATACTTTGTTTCATCAGTTGATGCCACTAATGTCGTAGAAGATGCACCATATTTATTTAAGCTTCTGGACAAAGTAGTGGAAGAAATAGGTGAGGAAAATGTAGTGCAGGTAATCACTGAAAATACTCCTAACTATAAAGCTGCAGGGAAAATGCTTGAAGAGAGGAGAAGAAATTTGTTTTGGACTCCTTGCGCTACCTACTGTTTTAATCAAGTGCTTGAAGATTTCATGAAGATAAAATTTGTAGAAGAGTGCATGGAAAAGGGCCAAAAAATTACAAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAGTGAATTTACCCAGGGAAAGGATCTTCTTAGACCAGCCGGCACCCAGTGTGCTTCTAGCTTTGCTACATTGCTGAGTTTGTTGGATCATCGAGTTAGTCTCAGACGAATGTTTCTTTCAAACAAATGGATGTCATCCAGGTTCTCCAGCTCAAGTGAGGGGAAAGAGGTGCAAAGAATTGTTCTGAATGTTACATTTTGGAAGAAAATGCAGTATGTGAGGAAGTCAGTGGAACCCATTTTGCAAGTGATTCAAAAGCTGTCTAGTGGCGAGAGCTTGTCAATGCCATTTTTATATAACGACTTGTACAGGGCAAGACTTGCAATCAAATTTGGTCTTGGCGATGATGCACGTAAATATGAACCATTCTTGAAGGTGATAGACAGGCATTGTAACTCTCTGTTCTGTCATCCTCTTTACAAGGCTGCTTACTTCTTGAATCCATCATACCGATACCGTCAGGATTTTGCTGCGCATTCTGAGGTAGTACGAGGGCTGAATGAATGCATTGTTCGGCTAGATCTAGATAGTATGAGACGAATATCTGCATCTATGCAAATTGCTCATTATAATTCTGCACAAGATGATTTTGGAACTGAATTGGCAATTAGCACAAGAACAGATCTTGAACCAGCTGCTTGGTGGCAACAGCATGGAATAAGTTGCTTAGAGTTGCAAAGAATAGCCGTGCGTATATTAAGTCAGACATGCTCATCTTTTGCATGTGAGCATGATTCAAGTATGTATGATCAGATATATAACAAAAGAAAAAATCGTCTATCTCAGAAGAAACTTAACGACATTATGTACGTTCACTATAACTTACGCCTTAGAGAATGCCAAGTAAGGAAAAGGTCCAGGGAGTCAAAGTCAACATCTGTTGACAATGTTTTACAAGAGCATTTACTTGGTGACTGGATAGTTGATACCGCTGCACAAAGCTCCGATGTTGATAAGAATATCCCTTTCGGAGTTGAATTAGACGATGAATATGAAAATGATTCAATTGACTATGAAGATGGTGGAGCTGCAAGACATCTAAAGGGTTCCCTTGAACTGATGACTATGGCTGACGGAGCAGTAGGATCATCAGATGCAGATCATGCTAACATCGATGGAGCCACTGACGATGAGTCGGATCTGAATTATTTTGACGATGATTTAAGCGAGTAA 2706 0.3984 MAPIRSTGFVDPGWDHGIAQDERKKKVRCNYCGKVVSGGIYRLKQHLARVSGEVTYCEKAPEEVYLKMKENLEGCRSNKKQKQVDAQAYMNFHSNDDEDDEEQVGCRSKGRQLMVERNASVNLTPLRSLGYIDPGWEHGVAQDERKKKVKCSYCEKVVSGGINRFKQHLARIPGEVAPCKSAPEEVYLKIKDNMKWHRTGKRHRHPEGKELLAFYSKSDNDDEEYEQPEDTLHHINKEALIDIDRRYSKDTEKTFKGMSTGPEPVLRRSKLDSFYRKPPTNQTPTTYKHLKVKTGSSTKKLRKEVISSICKFFCHAGIPLQAADSIYFHKMLEMAGQYGQGLVCPPSQVISSRFLQEEINSIKNYLIEYKASWAITGCSVLADSWRDTQGRTIINFLVSCPHGVYFVSSVDATNVVEDAPYLFKLLDKVVEEIGEENVVQVITENTPNYKAAGKMLEERRRNLFWTPCATYCFNQVLEDFMKIKFVEECMEKGQKITKLIYNQIWLLNLMKSEFTQGKDLLRPAGTQCASSFATLLSLLDHRVSLRRMFLSNKWMSSRFSSSSEGKEVQRIVLNVTFWKKMQYVRKSVEPILQVIQKLSSGESLSMPFLYNDLYRARLAIKFGLGDDARKYEPFLKVIDRHCNSLFCHPLYKAAYFLNPSYRYRQDFAAHSEVVRGLNECIVRLDLDSMRRISASMQIAHYNSAQDDFGTELAISTRTDLEPAAWWQQHGISCLELQRIAVRILSQTCSSFACEHDSSMYDQIYNKRKNRLSQKKLNDIMYVHYNLRLRECQVRKRSRESKSTSVDNVLQEHLLGDWIVDTAAQSSDVDKNIPFGVELDDEYENDSIDYEDGGAARHLKGSLELMTMADGAVGSSDADHANIDGATDDESDLNYFDDDLSE 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01075 901 SUPERFAMILY Ribonuclease H-like 370 788 IPR012337 -
Vivi4g01075 901 Pfam Protein of unknown function (DUF 659) 345 496 IPR007021 -
Vivi4g01075 901 MobiDBLite consensus disorder prediction 873 901 - -
Vivi4g01075 901 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Vivi4g01075 901 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Vivi4g01075 901 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Vivi4g01075 901 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Vivi4g01075 901 PANTHER OSJNBA0013A04.12 PROTEIN 20 85 - -
Vivi4g01075 901 Pfam hAT family C-terminal dimerisation region 714 786 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01075 Vivi-Chr4 32482963 32487882 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01075 - - tpra:123882853 1640.94