Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01063 ATGGTGCAAACTAAGGATGCAACTGTTGCTGTAGCTTCCGCTTTTTCTGGCCACAAGCAAGCTATTAAGGATAGAGACCACAAATTTTTAAAAAAGGCAGTTGAAGAAGCATATAAAGGTGTAGATTGTGAAGATGGAGGTCCTTTTGGTGCTGTTATTGTTTTGAATGATGAAGTTGTGGCTAGTTGTCACAATATGGTTCTCAGAAACAATGACCCTACTGCTCATGCTGAAGTCACAGCAATTAGAGAGGCTTGTAAGAAACTGAAGCAGATAGAACTTTCTGATTGTGAAATATATGCTTCTTGTGAGCCATGTCCAATGTGCTTTGGTGCTATTCACCTTTCACGTGTTAAGAGGTTGGTTTATGGAGCAAAAGCAGAGGCTGCAATTGCGATTGGTTTTGATGATTTTATAGCTGATGCATTGCGAGGAACTGGATTTTATCAAAAAGCACATCTGGAAATTAAAAGAGCTGATGGCAAAGAGGCCATTATTGCTGAAGAAGTGTTTGAGAAAACTAAAGAAAAATTTCGAATGTATTAA 546 0.3846 MVQTKDATVAVASAFSGHKQAIKDRDHKFLKKAVEEAYKGVDCEDGGPFGAVIVLNDEVVASCHNMVLRNNDPTAHAEVTAIREACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKAHLEIKRADGKEAIIAEEVFEKTKEKFRMY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01063 181 CDD nucleoside_deaminase 30 137 - -
Vivi4g01063 181 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 24 138 IPR002125 -
Vivi4g01063 181 Gene3D Cytidine Deaminase, domain 2 17 180 - -
Vivi4g01063 181 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 76 113 IPR016192 GO:0008270|GO:0016787
Vivi4g01063 181 SUPERFAMILY Cytidine deaminase-like 21 139 IPR016193 GO:0003824
Vivi4g01063 181 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 18 128 - -
Vivi4g01063 181 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 25 124 IPR002125 -
Vivi4g01063 181 FunFam tRNA-specific adenosine deaminase 24 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01063 Vivi-Chr4 31885857 31887538 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01063 - - gmx:100500436 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00889 1 19075202 19078108 Vivi4g01063 4 31885857 31887538 PCT