Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01061 ATGGATAACAAGACATCATCCTCGTCAAGACCAAAAACTGCTGATTTGGATGCACCTCTTGATACCATAGGATTTGAGTTTGAAGATATATCAGCTGAGAAAGTTTCTGGAAATCTTCATCTTACCCAAAAGTGTTGCCAGCCATTTAAGGTGCTTCATGGAGGTGTATCAGCATTGATAGCAGAATCACTAGCAAGTATTGGAGCACATATTGCTTGTGGTTACAAAAGAGTTGCAGGAATTCAACTTAGCATCAATCATTTGAAAGCGGCTTTTATTGGTGATTTTATTCATGCTGAAGCCACACCTTTGACTGTTGGGAAATCAATTCAGGTGTGGGATGTGAGAATCTGGAAGGTTGATCCTTCAAATTCACAAGACAAAATGTTGATAGCATCTTCTAGAGTTACTCTTAAAAGCAACATGCCAGTTCCAGAAAATGCAAAAAACGCCGGAGACTTGCTAAAGAGGCACGCAAAATTGTAG 486 0.3951 MDNKTSSSSRPKTADLDAPLDTIGFEFEDISAEKVSGNLHLTQKCCQPFKVLHGGVSALIAESLASIGAHIACGYKRVAGIQLSINHLKAAFIGDFIHAEATPLTVGKSIQVWDVRIWKVDPSNSQDKMLIASSRVTLKSNMPVPENAKNAGDLLKRHAKL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01061 161 Pfam Thioesterase superfamily 50 122 IPR006683 -
Vivi4g01061 161 Gene3D Hotdog Thioesterase 4 141 - -
Vivi4g01061 161 CDD PaaI_thioesterase 22 139 - -
Vivi4g01061 161 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 20 138 IPR029069 -
Vivi4g01061 161 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 3 160 - -
Vivi4g01061 161 FunFam 14-dihydroxy-2-naphthoyl-CoA thioesterase 1 6 141 - -
Vivi4g01061 161 NCBIfam hotdog fold thioesterase 21 137 IPR003736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01061 Vivi-Chr4 31800878 31802951 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01061 K19222 - gmx:100790693 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01061 4 31800878 31802951 Vivi4g01061 4 31800878 31802951 ECH