Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi4g01046 | ATGTTATCTTCTTCGCTCTCATTCCTTCACTCTTGCACATTTCCCTCTTCTTCCTCTTCCTTGTTCACAATTCCATCTCCAAATCCCAATTCTCCGTCTTCTTTATCCTTTGTGGTTGAAGCCAAGTCAAGTACCCGAAGGGAAGACAGAACTGCTCGCCATGTTCGTATCAGGAAGAAGGTTGAAGGAACACCCGAAAGACCAAGATTGTCTGTCTTCCGATCCAACAAGCATCTCTTTGTCCAGGTGATTGATGACACAAAGATGCATACAGTTGCTTCAGTTTCCACAATGCAGAAGGCAATTGCTGAAGAGTTCAACTACACCTCTGGCCCAACAATTGAAGTAGCAAAGAGGGTGGGTGAGATCATTGCAAAATACTGTCTGGCGAAGGGAATCACAAAAGTAGCCTTTGACCGTGGTGGTTACCCGTATCATGGCCGTGTTAAAGCTCTCGCTGATGCGGCTCGCGAACATGGCCTGGAGTTCTAA | 492 | 0.4634 | MLSSSLSFLHSCTFPSSSSSLFTIPSPNPNSPSSLSFVVEAKSSTRREDRTARHVRIRKKVEGTPERPRLSVFRSNKHLFVQVIDDTKMHTVASVSTMQKAIAEEFNYTSGPTIEVAKRVGEIIAKYCLAKGITKVAFDRGGYPYHGRVKALADAAREHGLEF | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi4g01046 | 163 | FunFam | 50S ribosomal protein L18 | 44 | 163 | - | - | |
| Vivi4g01046 | 163 | CDD | Ribosomal_L18_L5e | 57 | 161 | - | - | |
| Vivi4g01046 | 163 | SUPERFAMILY | Translational machinery components | 46 | 161 | - | - | |
| Vivi4g01046 | 163 | Hamap | 50S ribosomal protein L18 [rplR]. | 45 | 163 | IPR004389 | GO:0003735|GO:0005840|GO:0006412 | |
| Vivi4g01046 | 163 | PANTHER | 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL | 40 | 163 | IPR005484 | GO:0003735|GO:0005840|GO:0006412 | |
| Vivi4g01046 | 163 | Gene3D | - | 45 | 163 | - | - | |
| Vivi4g01046 | 163 | Pfam | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | 45 | 163 | IPR005484 | GO:0003735|GO:0005840|GO:0006412 | |
| Vivi4g01046 | 163 | NCBIfam | 50S ribosomal protein L18 | 47 | 163 | IPR004389 | GO:0003735|GO:0005840|GO:0006412 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi4g01046 | K02881 | - | gmx:100306308 | 237.269 |